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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180500248
OCAI01005071
235146
Actinomycetota
CGT
Thr
>WENV180500293
OCAI01007506
144589
Actinomycetota
ACG
Arg
>WENV180500258
OCAI01005325
37070
Actinomycetota
CGA
Ser
>WENV180500405
OCAI01018699
23370
Actinomycetota
GCT
Ser
>WENV180500393
OCAI01016497
338239
Actinomycetota
TTC
Glu
>WENV180500291
OCAI01007451
235174
Actinomycetota
TGC
Ala
>WENV180500312
OCAI01008173
235101
Actinomycetota
TTT
Lys
>WENV180500412
OCAI01021128
121510
Actinomycetota
TAA
Leu
>WENV180500280
OCAI01006302
44862
Actinomycetota
CGA
Ser
>WENV180500236
OCAI01004770
198659
Actinomycetota
TAC
Val
>WENV180500391
OCAI01016221
413665
Actinomycetota
TTG
Gln
>WENV180500325
OCAI01009050
254857
Actinomycetota
CCG
Arg
>WENV180500345
OCAI01011705
44942
Actinomycetota
TGA
Ser
>WENV180500339
OCAI01011075
295695
Actinomycetota
CTC
Glu
>WENV180500369
OCAI01014633
98279
Actinomycetota
GTA
Tyr
>WENV180500340
OCAI01011075
338148
Actinomycetota
CTG
Gln
>WENV180500315
OCAI01008400
235148
Actinomycetota
GTT
Asn
>WENV180500390
OCAI01016057
144825
Actinomycetota
CAT
Met
>WENV180500523
OCAI01061102
145347
Actinomycetota
CAA
Leu
>WENV180500446
OCAI01028633
235348
Actinomycetota
CCT
Arg
>WENV180500306
OCAI01007871
16467
Actinomycetota
GCT
Ser
>WENV180500294
OCAI01007513
411554
Actinomycetota
CCC
Gly
>WENV180500193
OCAI01003261
113601
Actinomycetota
TAG
Leu
>WENV180500290
OCAI01007439
145343
Actinomycetota
GGG
Pro
>WENV180500133
OCAI01002349
235149
Actinomycetota
CCT
Arg
>WENV180500409
OCAI01019688
51286
Actinomycetota
TGA
Ser
>WENV180500116
OCAI01002153
91808
Actinomycetota
CAG
Leu
>WENV180500219
OCAI01004039
145269
Actinomycetota
CAT
Met
>WENV180500192
OCAI01003261
235121
Actinomycetota
CGT
Thr
>WENV180500229
OCAI01004402
144635
Actinomycetota
TGG
Pro
>WENV180500207
OCAI01003646
119485
Actinomycetota
TAA
Leu
>WENV180500484
OCAI01041818
17009
Actinomycetota
GAG
Leu
>WENV180500292
OCAI01007451
235173
Actinomycetota
GGC
Ala
>WENV180500399
OCAI01017903
144660
Actinomycetota
TAC
Val
>WENV180500400
OCAI01018165
278447
Actinomycetota
GTG
His
>WENV180500365
OCAI01014100
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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