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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180514316
OCHB01000766
235146
Actinomycetota
CGT
Thr
>WENV180513692
OCHB01000017
235347
Actinomycetota
GGC
Ala
>WENV180513693
OCHB01000017
235347
Actinomycetota
GGC
Ala
>WENV180513797
OCHB01000067
201717
Actinomycetota
CTT
Lys
>WENV180513694
OCHB01000017
144600
Actinomycetota
TGG
Pro
>WENV180513966
OCHB01000198
235194
Actinomycetota
GTG
His
>WENV180514314
OCHB01000766
273786
Actinomycetota
CGT
Thr
>WENV180513696
OCHB01000017
158720
Actinomycetota
ACG
Arg
>WENV180513695
OCHB01000017
158720
Actinomycetota
ACG
Arg
>WENV180513718
OCHB01000035
411601
Actinomycetota
CCC
Gly
>WENV180514068
OCHB01000312
144826
Actinomycetota
GGG
Pro
>WENV180513772
OCHB01000059
23370
Actinomycetota
GCT
Ser
>WENV180513720
OCHB01000035
174149
Actinomycetota
GAT
Ile
>WENV180513776
OCHB01000059
338239
Actinomycetota
TTC
Glu
>WENV180513721
OCHB01000035
235174
Actinomycetota
TGC
Ala
>WENV180513948
OCHB01000182
121510
Actinomycetota
TAA
Leu
>WENV180513800
OCHB01000067
356045
Actinomycetota
GAC
Val
>WENV180515082
OCHB01077411
150473
Actinomycetota
CTC
Glu
>WENV180513774
OCHB01000059
44855
Actinomycetota
TGA
Ser
>WENV180513801
OCHB01000067
235199
Actinomycetota
CAC
Val
>WENV180513773
OCHB01000059
44862
Actinomycetota
CGA
Ser
>WENV180513691
OCHB01000017
413665
Actinomycetota
TTG
Gln
>WENV180513798
OCHB01000067
254857
Actinomycetota
CCG
Arg
>WENV180513771
OCHB01000059
144700
Actinomycetota
CAT
Met
>WENV180514425
OCHB01001087
295695
Actinomycetota
CTC
Glu
>WENV180514426
OCHB01001087
338148
Actinomycetota
CTG
Gln
>WENV180514093
OCHB01000358
235148
Actinomycetota
GTT
Asn
>WENV180514092
OCHB01000358
235148
Actinomycetota
GTT
Asn
>WENV180513795
OCHB01000067
53078
Actinomycetota
GGA
Ser
>WENV180513688
OCHB01000017
338238
Actinomycetota
CCA
Trp
>WENV180514001
OCHB01000244
144825
Actinomycetota
CAT
Met
>WENV180514002
OCHB01000244
235348
Actinomycetota
CCT
Arg
>WENV180514315
OCHB01000766
113601
Actinomycetota
TAG
Leu
>WENV180513949
OCHB01000182
144595
Actinomycetota
CAA
Leu
>WENV180513690
OCHB01000017
17009
Actinomycetota
GAG
Leu
>WENV180513719
OCHB01000035
80622
Actinomycetota
CAG
Leu
>WENV180514094
OCHB01000358
243162
Actinomycetota
GTT
Asn
>WENV180513875
OCHB01000110
144660
Actinomycetota
TAC
Val
>WENV180513770
OCHB01000059
95593
Actinomycetota
>WENV180513965
OCHB01000198
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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