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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180527461
OCHJ01000148
235097
Bacteroidota
TTT
Lys
>WENV180527737
OCHJ01000462
235097
Bacteroidota
TTT
Lys
>WENV180527792
OCHJ01000564
235097
Bacteroidota
TTT
Lys
>WENV180527864
OCHJ01000691
235097
Bacteroidota
TTT
Lys
>WENV180528062
OCHJ01001244
235097
Bacteroidota
TTT
Lys
>WENV180528074
OCHJ01001322
235097
Bacteroidota
TTT
Lys
>WENV180528792
OCHJ01022433
235097
Bacteroidota
TTT
Lys
>WENV180528747
OCHJ01018403
235102
Bacteroidota
CGT
Thr
>WENV180528928
OCHJ01043489
267954
Bacteroidota
GCC
Gly
>WENV180528726
OCHJ01016897
144657
Bacteroidota
CGG
Pro
>WENV180527328
OCHJ01000054
243025
Bacteroidota
CAT
Met
>WENV180527846
OCHJ01000652
243025
Bacteroidota
CAT
Met
>WENV180528764
OCHJ01019891
243025
Bacteroidota
CAT
Met
>WENV180527540
OCHJ01000207
338155
Bacteroidota
CTC
Glu
>WENV180528740
OCHJ01017800
153993
Bacteroidota
GAT
Ile
>WENV180528526
OCHJ01006674
343138
Bacteroidota
CCT
Arg
>WENV180528562
OCHJ01008060
46165
Bacteroidota
TGA
Ser
>WENV180528611
OCHJ01009870
17323
Bacteroidota
GGA
Ser
>WENV180527377
OCHJ01000093
17323
Bacteroidota
GGA
Ser
>WENV180528572
OCHJ01008404
338486
Bacteroidota
CAT
Met
>WENV180529141
OCHJ01105811
48053
Bacteroidota
TGA
Ser
>WENV180528884
OCHJ01035671
48053
Bacteroidota
TGA
Ser
>WENV180528853
OCHJ01030271
48053
Bacteroidota
TGA
Ser
>WENV180528661
OCHJ01012197
48053
Bacteroidota
TGA
Ser
>WENV180528316
OCHJ01002809
48053
Bacteroidota
TGA
Ser
>WENV180527949
OCHJ01000857
48053
Bacteroidota
TGA
Ser
>WENV180527785
OCHJ01000546
48053
Bacteroidota
TGA
Ser
>WENV180527758
OCHJ01000496
48053
Bacteroidota
TGA
Ser
>WENV180528669
OCHJ01012818
415410
Bacteroidota
TTG
Gln
>WENV180528113
OCHJ01001454
415410
Bacteroidota
TTG
Gln
>WENV180528021
OCHJ01001084
415410
Bacteroidota
TTG
Gln
>WENV180527819
OCHJ01000609
415410
Bacteroidota
TTG
Gln
>WENV180527135
OCHJ01000003
415410
Bacteroidota
TTG
Gln
>WENV180528784
OCHJ01021429
59689
Bacteroidota
CAG
Leu
>WENV180527768
OCHJ01000510
80835
Bacteroidota
GTA
Tyr
>WENV180528507
OCHJ01006381
344692
Bacteroidota
GGT
Thr
>WENV180528466
OCHJ01005239
344692
Bacteroidota
GGT
Thr
>WENV180527594
OCHJ01000256
344692
Bacteroidota
GGT
Thr
>WENV180528420
OCHJ01004115
341950
Bacteroidota
>WENV180527821
OCHJ01000611
341950
Bacteroidota
>WENV180528059
OCHJ01001235
338124
Bacteroidota
CCG
Arg
>WENV180527648
OCHJ01000316
168744
Bacteroidota
GTG
His
>WENV180528729
OCHJ01017037
235203
Bacteroidota
TTT
Lys
>WENV180528416
OCHJ01004062
126641
Bacteroidota
TAC
Val
>WENV180528414
OCHJ01004009
338132
Bacteroidota
GCA
Cys
>WENV180528372
OCHJ01003541
338132
Bacteroidota
GCA
Cys
>WENV180527709
OCHJ01000409
338132
Bacteroidota
GCA
Cys
>WENV180527680
OCHJ01000363
338132
Bacteroidota
GCA
Cys
>WENV180528773
OCHJ01020501
58714
Bacteroidota
CAA
Leu
>WENV180528706
OCHJ01015482
235165
Bacteroidota
CCA
Trp
>WENV180528450
OCHJ01004799
144933
Bacteroidota
TCT
Arg
>WENV180527610
OCHJ01000274
144933
Bacteroidota
TCT
Arg
>WENV180527831
OCHJ01000627
144656
Bacteroidota
GTG
His
>WENV180528218
OCHJ01002065
235207
Bacteroidota
CAT
Met
>WENV180528031
OCHJ01001109
235207
Bacteroidota
CAT
Met
>WENV180527650
OCHJ01000319
235207
Bacteroidota
CAT
Met
>WENV180528903
OCHJ01040041
235180
Bacteroidota
CCA
Trp
>WENV180528110
OCHJ01001419
144596
Bacteroidota
GGC
Ala
>WENV180528900
OCHJ01038674
80607
Bacteroidota
GTA
Tyr
>WENV180528596
OCHJ01009243
80607
Bacteroidota
GTA
Tyr
>WENV180528167
OCHJ01001708
80607
Bacteroidota
GTA
Tyr
>WENV180528060
OCHJ01001236
80607
Bacteroidota
GTA
Tyr
>WENV180527772
OCHJ01000514
80607
Bacteroidota
GTA
Tyr
>WENV180528908
OCHJ01041122
16999
Bacteroidota
GGA
Ser
>WENV180529298
OCHJ01220322
80614
Bacteroidota
>WENV180528470
OCHJ01005393
80614
Bacteroidota
>WENV180527704
OCHJ01000391
154643
Bacteroidota
CAT
Met
>WENV180527669
OCHJ01000345
154643
Bacteroidota
CAT
Met
>WENV180528779
OCHJ01020911
144590
Bacteroidota
GTT
Asn
>WENV180528778
OCHJ01020911
144590
Bacteroidota
GTT
Asn
>WENV180528702
OCHJ01015183
95559
Bacteroidota
TAG
Leu
>WENV180528431
OCHJ01004318
95559
Bacteroidota
TAG
Leu
>WENV180528615
OCHJ01009977
419272
Bacteroidota
CTG
Gln
>WENV180528822
OCHJ01026537
144655
Bacteroidota
GGC
Ala
>WENV180528114
OCHJ01001458
144655
Bacteroidota
GGC
Ala
>WENV180528330
OCHJ01002975
338164
Bacteroidota
TTC
Glu
>WENV180528644
OCHJ01011286
95875
Bacteroidota
TAG
Leu
>WENV180528848
OCHJ01029922
240012
Bacteroidota
CCC
Gly
>WENV180528320
OCHJ01002860
44852
Bacteroidota
TAA
Leu
>WENV180527620
OCHJ01000282
44852
Bacteroidota
TAA
Leu
>WENV180528437
OCHJ01004437
150485
Bacteroidota
GTT
Asn
>WENV180528436
OCHJ01004428
411550
Bacteroidota
CTG
Gln
>WENV180529109
OCHJ01095246
338165
Bacteroidota
GGT
Thr
>WENV180528084
OCHJ01001349
239647
Bacteroidota
TTT
Lys
>WENV180528531
OCHJ01006825
353927
Bacteroidota
TTC
Glu
>WENV180528152
OCHJ01001609
353927
Bacteroidota
TTC
Glu
>WENV180527539
OCHJ01000207
23696
Bacteroidota
GCT
Ser
>WENV180527638
OCHJ01000298
414426
Bacteroidota
CTG
Gln
>WENV180527588
OCHJ01000247
414426
Bacteroidota
CTG
Gln
>WENV180529021
OCHJ01061454
16224
Bacteroidota
GGA
Ser
>WENV180527480
OCHJ01000162
16224
Bacteroidota
GGA
Ser
>WENV180528771
OCHJ01020392
151960
Bacteroidota
GGC
Ala
>WENV180528580
OCHJ01008629
151960
Bacteroidota
GGC
Ala
>WENV180528092
OCHJ01001367
16220
Bacteroidota
GGA
Ser
>WENV180528454
OCHJ01004880
338125
Bacteroidota
CCT
Arg
>WENV180528835
OCHJ01027862
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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