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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180566599
OCLK01002505
155958
Bacillota
GAT
Ile
>WENV180566671
OCLK01013569
144612
Bacillota
TCT
Arg
>WENV180566662
OCLK01012338
44854
Bacillota
TGA
Ser
>WENV180566628
OCLK01004847
304022
Bacillota
GCC
Gly
>WENV180566631
OCLK01005828
304022
Bacillota
GCC
Gly
>WENV180566646
OCLK01009385
304022
Bacillota
GCC
Gly
>WENV180566578
OCLK01000223
238910
Bacillota
CTT
Lys
>WENV180566633
OCLK01006034
235294
Bacillota
TGC
Ala
>WENV180566727
OCLK01039308
340802
Bacillota
TTG
Gln
>WENV180566659
OCLK01012242
144668
Bacillota
GTC
Asp
>WENV180566712
OCLK01025888
429429
Bacillota
CCA
Trp
>WENV180566624
OCLK01004489
313454
Bacillota
GAA
Phe
>WENV180566661
OCLK01012242
41154
Bacillota
TAA
Leu
>WENV180566627
OCLK01004847
235079
Bacillota
GAA
Phe
>WENV180566574
OCLK01000115
287000
Bacillota
GTT
Asn
>WENV180566716
OCLK01027674
169968
Bacillota
CAT
Met
>WENV180566623
OCLK01004489
169968
Bacillota
CAT
Met
>WENV180566609
OCLK01003706
152492
Bacillota
GGG
Pro
>WENV180566564
OCLK01000051
235078
Bacillota
TAC
Val
>WENV180566533
OCLK01000007
235078
Bacillota
TAC
Val
>WENV180566529
OCLK01000007
235078
Bacillota
TAC
Val
>WENV180566726
OCLK01039308
144610
Bacillota
GTG
His
>WENV180566567
OCLK01000051
240017
Bacillota
GCC
Gly
>WENV180566536
OCLK01000007
240017
Bacillota
GCC
Gly
>WENV180566532
OCLK01000007
240017
Bacillota
GCC
Gly
>WENV180566776
OCLK01068072
411547
Bacillota
CTG
Gln
>WENV180566598
OCLK01002492
147684
Bacillota
ACG
Arg
>WENV180566663
OCLK01012338
4624
Bacillota
GCT
Ser
>WENV180566736
OCLK01045597
235095
Bacillota
GGT
Thr
>WENV180566785
OCLK01080637
148188
Bacillota
CCG
Arg
>WENV180566706
OCLK01023767
338129
Bacillota
TGT
Thr
>WENV180566754
OCLK01055079
144652
Bacillota
GTC
Asp
>WENV180566585
OCLK01000642
247734
Bacillota
TGC
Ala
>WENV180566720
OCLK01032525
144621
Bacillota
GTT
Asn
>WENV180566593
OCLK01001944
21693
Bacillota
GCT
Ser
>WENV180566753
OCLK01053225
144594
Bacillota
CAC
Val
>WENV180566703
OCLK01021869
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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