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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180599202
OCPP01000228
97336
Bacteroidota
CAG
Leu
>WENV180598985
OCPP01000001
338155
Bacteroidota
CTC
Glu
>WENV180599033
OCPP01000018
95618
Bacteroidota
TAG
Leu
>WENV180599138
OCPP01000123
413663
Bacteroidota
CTG
Gln
>WENV180599477
OCPP01001241
136244
Bacteroidota
TAC
Val
>WENV180599975
OCPP01014260
136244
Bacteroidota
TAC
Val
>WENV180599014
OCPP01000007
411543
Bacteroidota
CTG
Gln
>WENV180599253
OCPP01000346
144695
Bacteroidota
CAT
Met
>WENV180599006
OCPP01000003
235182
Bacteroidota
>WENV180599020
OCPP01000012
272983
Bacteroidota
CGT
Thr
>WENV180599064
OCPP01000037
338132
Bacteroidota
GCA
Cys
>WENV180599093
OCPP01000072
144688
Bacteroidota
CAT
Met
>WENV180599548
OCPP01001761
37076
Bacteroidota
TAA
Leu
>WENV180599008
OCPP01000004
181746
Bacteroidota
GGC
Ala
>WENV180598987
OCPP01000001
144933
Bacteroidota
TCT
Arg
>WENV180599134
OCPP01000113
235207
Bacteroidota
CAT
Met
>WENV180599012
OCPP01000006
80607
Bacteroidota
GTA
Tyr
>WENV180599102
OCPP01000078
344769
Bacteroidota
CTC
Glu
>WENV180599559
OCPP01001940
415558
Bacteroidota
TTG
Gln
>WENV180599059
OCPP01000036
338314
Bacteroidota
CCT
Arg
>WENV180599013
OCPP01000007
139743
Bacteroidota
GGG
Pro
>WENV180600103
OCPP01027481
238606
Bacteroidota
CGG
Pro
>WENV180599076
OCPP01000056
338165
Bacteroidota
GGT
Thr
>WENV180599036
OCPP01000020
19317
Bacteroidota
GGA
Ser
>WENV180598989
OCPP01000001
139062
Bacteroidota
TGG
Pro
>WENV180599203
OCPP01000228
59498
Bacteroidota
GAG
Leu
>WENV180599063
OCPP01000037
55270
Bacteroidota
TGA
Ser
>WENV180599062
OCPP01000037
55270
Bacteroidota
TGA
Ser
>WENV180599041
OCPP01000023
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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