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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180633417
OCRA01005221
235102
Bacteroidota
CGT
Thr
>WENV180633994
OCRA01129084
338155
Bacteroidota
CTC
Glu
>WENV180633342
OCRA01000179
339341
Bacteroidota
GGT
Thr
>WENV180634144
OCRA01226753
95618
Bacteroidota
TAG
Leu
>WENV180633432
OCRA01006140
338486
Bacteroidota
CAT
Met
>WENV180633366
OCRA01001748
59689
Bacteroidota
CAG
Leu
>WENV180633428
OCRA01005560
436206
Bacteroidota
TTG
Gln
>WENV180633416
OCRA01005206
20893
Bacteroidota
GGA
Ser
>WENV180633612
OCRA01034322
238121
Bacteroidota
CTT
Lys
>WENV180634205
OCRA01272872
338132
Bacteroidota
GCA
Cys
>WENV180633346
OCRA01000351
193809
Bacteroidota
CAT
Met
>WENV180633744
OCRA01054273
301449
Bacteroidota
CGG
Pro
>WENV180633431
OCRA01006105
301449
Bacteroidota
CGG
Pro
>WENV180633368
OCRA01001834
301449
Bacteroidota
CGG
Pro
>WENV180633783
OCRA01061815
144656
Bacteroidota
GTG
His
>WENV180634004
OCRA01136641
235207
Bacteroidota
CAT
Met
>WENV180634088
OCRA01179013
144659
Bacteroidota
GTG
His
>WENV180633462
OCRA01010828
80607
Bacteroidota
GTA
Tyr
>WENV180633327
OCRA01000002
80607
Bacteroidota
GTA
Tyr
>WENV180633824
OCRA01070419
113604
Bacteroidota
>WENV180633362
OCRA01001383
113604
Bacteroidota
>WENV180633341
OCRA01000179
80614
Bacteroidota
>WENV180633350
OCRA01000506
95559
Bacteroidota
TAG
Leu
>WENV180633734
OCRA01053940
338164
Bacteroidota
TTC
Glu
>WENV180633958
OCRA01115324
44852
Bacteroidota
TAA
Leu
>WENV180634207
OCRA01274801
411550
Bacteroidota
CTG
Gln
>WENV180633398
OCRA01003802
338165
Bacteroidota
GGT
Thr
>WENV180633373
OCRA01001990
425638
Bacteroidota
CTG
Gln
>WENV180634220
OCRA01279759
185921
Bacteroidota
GTC
Asp
>WENV180634147
OCRA01228999
23696
Bacteroidota
GCT
Ser
>WENV180634250
OCRA01389275
55270
Bacteroidota
TGA
Ser
>WENV180633954
OCRA01113954
55270
Bacteroidota
TGA
Ser
>WENV180633345
OCRA01000320
16224
Bacteroidota
GGA
Ser
>WENV180633339
OCRA01000174
16220
Bacteroidota
GGA
Ser
>WENV180633391
OCRA01003391
338125
Bacteroidota
CCT
Arg
>WENV180634223
OCRA01280069
235129
Bacteroidota
GCC
Gly
>WENV180634069
OCRA01166675
235129
Bacteroidota
GCC
Gly
>WENV180634211
OCRA01276927
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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