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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180728429
ODGU01048780
411654
Campylobacterota
GCA
Cys
>WENV180728430
ODGU01048780
23937
Campylobacterota
TGA
Ser
>WENV180727612
ODGU01008525
170960
Campylobacterota
TCG
Arg
>WENV180728926
ODGU01124271
243184
Campylobacterota
GAC
Val
>WENV180729164
ODGU01231385
243184
Campylobacterota
GAC
Val
>WENV180727610
ODGU01008525
127212
Campylobacterota
TGG
Pro
>WENV180729018
ODGU01157181
162606
Campylobacterota
CCT
Arg
>WENV180727754
ODGU01011388
338365
Campylobacterota
GGT
Thr
>WENV180728714
ODGU01083638
353400
Campylobacterota
CTC
Glu
>WENV180728108
ODGU01024709
146879
Campylobacterota
CAT
Met
>WENV180728900
ODGU01118621
149516
Campylobacterota
CAT
Met
>WENV180728428
ODGU01048780
60256
Campylobacterota
TAA
Leu
>WENV180728438
ODGU01049098
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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