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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180743484
ODHI01000496
235097
Bacteroidota
TTT
Lys
>WENV180743486
ODHI01000514
235102
Bacteroidota
CGT
Thr
>WENV180743492
ODHI01000579
343138
Bacteroidota
CCT
Arg
>WENV180743673
ODHI01033598
17323
Bacteroidota
GGA
Ser
>WENV180743446
ODHI01000118
415410
Bacteroidota
TTG
Gln
>WENV180743731
ODHI01073006
20893
Bacteroidota
GGA
Ser
>WENV180743649
ODHI01024240
155123
Bacteroidota
GTT
Asn
>WENV180743480
ODHI01000428
338124
Bacteroidota
CCG
Arg
>WENV180743732
ODHI01073703
146800
Bacteroidota
>WENV180743515
ODHI01001007
338132
Bacteroidota
GCA
Cys
>WENV180743448
ODHI01000122
338132
Bacteroidota
GCA
Cys
>WENV180743527
ODHI01001307
301449
Bacteroidota
CGG
Pro
>WENV180743468
ODHI01000237
301449
Bacteroidota
CGG
Pro
>WENV180743751
ODHI01084926
144933
Bacteroidota
TCT
Arg
>WENV180743679
ODHI01034946
136207
Bacteroidota
TAC
Val
>WENV180743443
ODHI01000108
235207
Bacteroidota
CAT
Met
>WENV180743747
ODHI01084898
80607
Bacteroidota
GTA
Tyr
>WENV180743688
ODHI01038755
80607
Bacteroidota
GTA
Tyr
>WENV180743584
ODHI01007071
80607
Bacteroidota
GTA
Tyr
>WENV180743638
ODHI01022428
113604
Bacteroidota
>WENV180743520
ODHI01001054
52358
Bacteroidota
TGA
Ser
>WENV180743465
ODHI01000217
52358
Bacteroidota
TGA
Ser
>WENV180743462
ODHI01000179
52358
Bacteroidota
TGA
Ser
>WENV180743566
ODHI01004283
154643
Bacteroidota
CAT
Met
>WENV180743433
ODHI01000069
144590
Bacteroidota
GTT
Asn
>WENV180743439
ODHI01000089
419272
Bacteroidota
CTG
Gln
>WENV180743752
ODHI01084934
44852
Bacteroidota
TAA
Leu
>WENV180743464
ODHI01000215
150485
Bacteroidota
GTT
Asn
>WENV180743475
ODHI01000344
132360
Bacteroidota
GGG
Pro
>WENV180743508
ODHI01000802
425638
Bacteroidota
CTG
Gln
>WENV180743655
ODHI01025093
414426
Bacteroidota
CTG
Gln
>WENV180743628
ODHI01018872
48914
Bacteroidota
TGA
Ser
>WENV180743551
ODHI01002582
16220
Bacteroidota
GGA
Ser
>WENV180743512
ODHI01000926
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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