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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180766019
ODID01017168
339412
Bacteroidota
GGT
Thr
>WENV180766117
ODID01044613
97336
Bacteroidota
CAG
Leu
>WENV180766094
ODID01038225
148096
Bacteroidota
GTG
His
>WENV180766136
ODID01055319
127253
Bacteroidota
GGG
Pro
>WENV180765846
ODID01002576
81773
Bacteroidota
CAG
Leu
>WENV180765943
ODID01008377
16898
Bacteroidota
GGA
Ser
>WENV180765842
ODID01002401
144639
Bacteroidota
GGC
Ala
>WENV180765879
ODID01004445
151121
Bacteroidota
CAT
Met
>WENV180765868
ODID01004066
240012
Bacteroidota
CCC
Gly
>WENV180765942
ODID01008319
280469
Bacteroidota
CGT
Thr
>WENV180765780
ODID01000836
244299
Bacteroidota
CGG
Pro
>WENV180765847
ODID01002576
60485
Bacteroidota
GAG
Leu
>WENV180765799
ODID01001325
127951
Bacteroidota
TAC
Val
>WENV180766018
ODID01017168
95986
Bacteroidota
GTA
Tyr
>WENV180766047
ODID01024043
412236
Bacteroidota
CCC
Gly
>WENV180766118
ODID01044613
59498
Bacteroidota
GAG
Leu
>WENV180765937
ODID01007621
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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