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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180969649
ODUU01000474
119661
Verrucomicrobiota
CAA
Leu
>WENV180970368
ODUU01002815
155256
Verrucomicrobiota
TCT
Arg
>WENV180969765
ODUU01000657
246701
Verrucomicrobiota
TTT
Lys
>WENV180970163
ODUU01001671
345141
Verrucomicrobiota
TTG
Gln
>WENV180971157
ODUU01015983
345133
Verrucomicrobiota
GAC
Val
>WENV180969971
ODUU01001073
82054
Verrucomicrobiota
GTA
Tyr
>WENV180970639
ODUU01005025
246677
Verrucomicrobiota
CTT
Lys
>WENV180970638
ODUU01005025
246677
Verrucomicrobiota
CTT
Lys
>WENV180971060
ODUU01013008
344844
Verrucomicrobiota
GCA
Cys
>WENV180970608
ODUU01004771
155264
Verrucomicrobiota
GGG
Pro
>WENV180970605
ODUU01004735
344845
Verrucomicrobiota
CTG
Gln
>WENV180970859
ODUU01008342
128202
Verrucomicrobiota
GTC
Asp
>WENV180970411
ODUU01003085
414625
Verrucomicrobiota
CCC
Gly
>WENV180970880
ODUU01008830
46246
Verrucomicrobiota
TGA
Ser
>WENV180970149
ODUU01001627
97755
Verrucomicrobiota
TAG
Leu
>WENV180970478
ODUU01003537
246700
Verrucomicrobiota
TTC
Glu
>WENV180970009
ODUU01001183
246700
Verrucomicrobiota
TTC
Glu
>WENV180970008
ODUU01001183
246700
Verrucomicrobiota
TTC
Glu
>WENV180970317
ODUU01002448
246687
Verrucomicrobiota
CGC
Ala
>WENV180970410
ODUU01003085
419909
Verrucomicrobiota
TCC
Gly
>WENV180970340
ODUU01002620
344841
Verrucomicrobiota
CAC
Val
>WENV180970535
ODUU01004041
60880
Verrucomicrobiota
CAG
Leu
>WENV180970531
ODUU01004008
82056
Verrucomicrobiota
TAA
Leu
>WENV180970637
ODUU01005025
344842
Verrucomicrobiota
CGT
Thr
>WENV180971187
ODUU01017250
170105
Verrucomicrobiota
CAT
Met
>WENV180969947
ODUU01001023
287733
Verrucomicrobiota
CCA
Trp
>WENV180969897
ODUU01000935
345123
Verrucomicrobiota
TGT
Thr
>WENV180970564
ODUU01004291
345110
Verrucomicrobiota
CCT
Arg
>WENV180970479
ODUU01003537
344839
Verrucomicrobiota
GTG
His
>WENV180969899
ODUU01000946
7274
Verrucomicrobiota
CGA
Ser
>WENV180970455
ODUU01003354
246260
Verrucomicrobiota
>WENV180970407
ODUU01003060
155268
Verrucomicrobiota
CGG
Pro
>WENV180970033
ODUU01001197
82181
Verrucomicrobiota
AAG
Leu
>WENV180970197
ODUU01001824
246728
Verrucomicrobiota
GAA
Phe
>WENV180970456
ODUU01003354
7256
Verrucomicrobiota
GCT
Ser
>WENV180970561
ODUU01004272
345115
Verrucomicrobiota
CAT
Met
>WENV180970099
ODUU01001376
345119
Verrucomicrobiota
TAC
Val
>WENV180970482
ODUU01003543
345124
Verrucomicrobiota
GTT
Asn
>WENV180969550
ODUU01000316
17023
Verrucomicrobiota
GGA
Ser
>WENV180970691
ODUU01005640
368497
Verrucomicrobiota
GCC
Gly
>WENV180970533
ODUU01004020
368497
Verrucomicrobiota
GCC
Gly
>WENV180970650
ODUU01005095
345142
Verrucomicrobiota
CCG
Arg
>WENV180970480
ODUU01003537
246709
Verrucomicrobiota
CAT
Met
>WENV180970198
ODUU01001824
154693
Verrucomicrobiota
TGG
Pro
>WENV180969946
ODUU01001023
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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