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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180970455
ODUU01003354
260057
Verrucomicrobiota
>WENV180970535
ODUU01004041
65261
Verrucomicrobiota
CAG
Leu
>WENV180970650
ODUU01005095
370537
Verrucomicrobiota
CCG
Arg
>WENV180969899
ODUU01000946
8030
Verrucomicrobiota
CGA
Ser
>WENV180970637
ODUU01005025
370538
Verrucomicrobiota
CGT
Thr
>WENV180970605
ODUU01004735
370526
Verrucomicrobiota
CTG
Gln
>WENV180970456
ODUU01003354
8029
Verrucomicrobiota
GCT
Ser
>WENV180970967
ODUU01010710
290976
Verrucomicrobiota
GGC
Ala
>WENV180969971
ODUU01001073
88984
Verrucomicrobiota
GTA
Tyr
>WENV180970859
ODUU01008342
139132
Verrucomicrobiota
GTC
Asp
>WENV180970531
ODUU01004008
88983
Verrucomicrobiota
TAA
Leu
>WENV180970099
ODUU01001376
370530
Verrucomicrobiota
TAC
Val
>WENV180970410
ODUU01003085
448769
Verrucomicrobiota
TCC
Gly
>WENV180970880
ODUU01008830
50031
Verrucomicrobiota
TGA
Ser
>WENV180970198
ODUU01001824
161141
Verrucomicrobiota
TGG
Pro
>WENV180969897
ODUU01000935
370534
Verrucomicrobiota
TGT
Thr
>WENV180970163
ODUU01001671
370525
Verrucomicrobiota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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