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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181010577
ODWH01073126
48052
Fusobacteriota
TAA
Leu
>WENV181010619
ODWH01109760
159267
Fusobacteriota
CAT
Met
>WENV181010459
ODWH01018599
242888
Fusobacteriota
GTT
Asn
>WENV181010386
ODWH01004879
151860
Fusobacteriota
ACG
Arg
>WENV181010464
ODWH01020143
156827
Fusobacteriota
GTC
Asp
>WENV181010404
ODWH01006412
115931
Fusobacteriota
TAG
Leu
>WENV181010512
ODWH01032970
152483
Fusobacteriota
GTC
Asp
>WENV181010489
ODWH01025581
246241
Fusobacteriota
TGC
Ala
>WENV181010614
ODWH01103244
343015
Fusobacteriota
TTG
Gln
>WENV181010385
ODWH01004879
155082
Fusobacteriota
TCG
Arg
>WENV181010520
ODWH01036750
242889
Fusobacteriota
TGT
Thr
>WENV181010387
ODWH01004879
60218
Fusobacteriota
CAA
Leu
>WENV181010466
ODWH01021242
152485
Fusobacteriota
TCT
Arg
>WENV181010611
ODWH01099441
154976
Fusobacteriota
TCG
Arg
>WENV181010403
ODWH01006412
248546
Fusobacteriota
TTT
Lys
>WENV181010522
ODWH01036750
113955
Fusobacteriota
>WENV181010465
ODWH01021242
246346
Fusobacteriota
TTT
Lys
>WENV181010521
ODWH01036750
346237
Fusobacteriota
TTC
Glu
>WENV181010499
ODWH01028114
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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