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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181029614
ODXF01001050
256200
Betaproteobacteria
CGT
Thr
>WENV181029611
ODXF01001013
155690
Betaproteobacteria
TCT
Arg
>WENV181029790
ODXF01004078
97609
Betaproteobacteria
CAA
Leu
>WENV181029324
ODXF01000099
159509
Betaproteobacteria
CAT
Met
>WENV181029360
ODXF01000183
159509
Betaproteobacteria
CAT
Met
>WENV181029959
ODXF01013443
412095
Betaproteobacteria
GCA
Cys
>WENV181029504
ODXF01000490
235250
Betaproteobacteria
>WENV181029649
ODXF01001478
95890
Betaproteobacteria
CAA
Leu
>WENV181029921
ODXF01010007
149294
Betaproteobacteria
TCT
Arg
>WENV181030092
ODXF01030086
240188
Betaproteobacteria
GAA
Phe
>WENV181029731
ODXF01002612
240188
Betaproteobacteria
GAA
Phe
>WENV181029690
ODXF01001954
240188
Betaproteobacteria
GAA
Phe
>WENV181030299
ODXF01137801
155338
Betaproteobacteria
>WENV181029860
ODXF01007072
155338
Betaproteobacteria
>WENV181029527
ODXF01000587
352197
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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