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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
1
, Akira Muto
6
, Yo Kikuchi
1
, Hachiro Inokuchi
1
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181029321
ODXF01000095
82600
Betaproteobacteria
CAG
Leu
>WENV181029324
ODXF01000099
195198
Betaproteobacteria
CAT
Met
>WENV181029323
ODXF01000099
282838
Betaproteobacteria
GTT
Asn
>WENV181029360
ODXF01000183
195198
Betaproteobacteria
CAT
Met
>WENV181029499
ODXF01000464
64962
Betaproteobacteria
CAG
Leu
>WENV181029504
ODXF01000490
256855
Betaproteobacteria
>WENV181029527
ODXF01000587
410903
Betaproteobacteria
GGT
Thr
>WENV181029534
ODXF01000600
88786
Betaproteobacteria
GAG
Leu
>WENV181029535
ODXF01000603
258578
Betaproteobacteria
>WENV181029610
ODXF01001013
229473
Betaproteobacteria
TGG
Pro
>WENV181029614
ODXF01001050
261323
Betaproteobacteria
CGT
Thr
>WENV181029649
ODXF01001478
105127
Betaproteobacteria
CAA
Leu
>WENV181029690
ODXF01001954
260219
Betaproteobacteria
GAA
Phe
>WENV181029702
ODXF01002215
5738
Betaproteobacteria
GCT
Ser
>WENV181029721
ODXF01002405
64962
Betaproteobacteria
CAG
Leu
>WENV181029724
ODXF01002453
448426
Betaproteobacteria
GCA
Cys
>WENV181029725
ODXF01002453
26276
Betaproteobacteria
TAA
Leu
>WENV181029741
ODXF01002864
260218
Betaproteobacteria
CCG
Arg
>WENV181029776
ODXF01003626
5404
Betaproteobacteria
GCT
Ser
>WENV181029788
ODXF01004045
100928
Betaproteobacteria
GAG
Leu
>WENV181029860
ODXF01007072
161292
Betaproteobacteria
>WENV181029958
ODXF01013178
26276
Betaproteobacteria
TAA
Leu
>WENV181029959
ODXF01013443
448824
Betaproteobacteria
GCA
Cys
>WENV181029977
ODXF01015032
18493
Betaproteobacteria
GGA
Ser
>WENV181030092
ODXF01030086
260219
Betaproteobacteria
GAA
Phe
>WENV181030299
ODXF01137801
183801
Betaproteobacteria
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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