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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181066578
ODZI01000263
243647
Bacillota
TTT
Lys
>WENV181066493
ODZI01000080
16842
Bacillota
CGA
Ser
>WENV181067769
ODZI01051615
37213
Bacillota
TGA
Ser
>WENV181066509
ODZI01000109
342730
Bacillota
CTC
Glu
>WENV181067015
ODZI01004825
235693
Bacillota
GGT
Thr
>WENV181067448
ODZI01018985
243099
Bacillota
GTT
Asn
>WENV181067816
ODZI01058347
243099
Bacillota
GTT
Asn
>WENV181067934
ODZI01076750
235137
Bacillota
TGC
Ala
>WENV181067820
ODZI01058347
241761
Bacillota
TAC
Val
>WENV181068168
ODZI01148320
419288
Bacillota
GGT
Thr
>WENV181066735
ODZI01001327
16834
Bacillota
GCT
Ser
>WENV181067822
ODZI01058347
239076
Bacillota
GAA
Phe
>WENV181066431
ODZI01000030
114002
Bacillota
CAA
Leu
>WENV181066536
ODZI01000146
37437
Bacillota
TAA
Leu
>WENV181068326
ODZI01272620
340265
Bacillota
GCC
Gly
>WENV181068325
ODZI01272620
340265
Bacillota
GCC
Gly
>WENV181066685
ODZI01000954
340265
Bacillota
GCC
Gly
>WENV181068243
ODZI01203147
113951
Bacillota
GTA
Tyr
>WENV181067333
ODZI01013287
243612
Bacillota
TAC
Val
>WENV181066580
ODZI01000263
243612
Bacillota
TAC
Val
>WENV181066507
ODZI01000097
341796
Bacillota
CCG
Arg
>WENV181067393
ODZI01016093
338676
Bacillota
CCG
Arg
>WENV181066543
ODZI01000164
81373
Bacillota
GTA
Tyr
>WENV181066373
ODZI01000004
81373
Bacillota
GTA
Tyr
>WENV181066811
ODZI01002038
147135
Bacillota
ACG
Arg
>WENV181067963
ODZI01080637
242848
Bacillota
GAA
Phe
>WENV181066438
ODZI01000039
342895
Bacillota
CAT
Met
>WENV181067915
ODZI01073071
241471
Bacillota
TGC
Ala
>WENV181068318
ODZI01271538
250349
Bacillota
GAA
Phe
>WENV181066589
ODZI01000299
96694
Bacillota
TAG
Leu
>WENV181068234
ODZI01195383
237846
Bacillota
GCC
Gly
>WENV181068341
ODZI01286178
235197
Bacillota
GTC
Asp
>WENV181067819
ODZI01058347
241526
Bacillota
CTT
Lys
>WENV181066377
ODZI01000004
241526
Bacillota
CTT
Lys
>WENV181067799
ODZI01055635
147183
Bacillota
GTT
Asn
>WENV181067045
ODZI01005362
243613
Bacillota
GTG
His
>WENV181068010
ODZI01099244
127572
Bacillota
ACG
Arg
>WENV181066508
ODZI01000105
127572
Bacillota
ACG
Arg
>WENV181067344
ODZI01013952
148495
Bacillota
TCT
Arg
>WENV181067016
ODZI01004825
152491
Bacillota
CAT
Met
>WENV181066545
ODZI01000164
243098
Bacillota
GGT
Thr
>WENV181066375
ODZI01000004
243098
Bacillota
GGT
Thr
>WENV181066833
ODZI01002324
241638
Bacillota
GTG
His
>WENV181066699
ODZI01001033
413657
Bacillota
CCC
Gly
>WENV181066532
ODZI01000144
152018
Bacillota
CCT
Arg
>WENV181068113
ODZI01129033
81598
Bacillota
CAG
Leu
>WENV181067046
ODZI01005362
343027
Bacillota
TTG
Gln
>WENV181068280
ODZI01238496
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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