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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181097681
OECA01020237
411654
Campylobacterota
GCA
Cys
>WENV181097682
OECA01020237
23937
Campylobacterota
TGA
Ser
>WENV181097623
OECA01016689
170960
Campylobacterota
TCG
Arg
>WENV181097653
OECA01018838
193571
Campylobacterota
CAT
Met
>WENV181097522
OECA01011070
20245
Campylobacterota
GCT
Ser
>WENV181097433
OECA01009072
238560
Campylobacterota
TTT
Lys
>WENV181097700
OECA01021258
243184
Campylobacterota
GAC
Val
>WENV181097621
OECA01016689
127212
Campylobacterota
TGG
Pro
>WENV181098056
OECA01071605
162606
Campylobacterota
CCT
Arg
>WENV181097243
OECA01004371
338365
Campylobacterota
GGT
Thr
>WENV181098120
OECA01089825
81005
Campylobacterota
TAA
Leu
>WENV181097438
OECA01009072
353400
Campylobacterota
CTC
Glu
>WENV181097434
OECA01009072
298002
Campylobacterota
>WENV181097635
OECA01017955
146879
Campylobacterota
CAT
Met
>WENV181097679
OECA01020237
397111
Campylobacterota
GCC
Gly
>WENV181097603
OECA01015711
397111
Campylobacterota
GCC
Gly
>WENV181098204
OECA01134872
60256
Campylobacterota
TAA
Leu
>WENV181097680
OECA01020237
60256
Campylobacterota
TAA
Leu
>WENV181097685
OECA01020303
379309
Campylobacterota
TTC
Glu
>WENV181098112
OECA01085480
145013
Campylobacterota
TCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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