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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181109360
OEEJ01032331
413566
Actinomycetota
CCC
Gly
>WENV181108986
OEEJ01002583
314498
Actinomycetota
GGC
Ala
>WENV181109509
OEEJ01095518
314498
Actinomycetota
GGC
Ala
>WENV181109147
OEEJ01009983
158373
Actinomycetota
GGG
Pro
>WENV181109513
OEEJ01098677
149272
Actinomycetota
TTT
Lys
>WENV181109150
OEEJ01010377
241401
Actinomycetota
CCA
Trp
>WENV181109493
OEEJ01088129
440908
Actinomycetota
GCA
Cys
>WENV181108990
OEEJ01002661
150473
Actinomycetota
CTC
Glu
>WENV181109009
OEEJ01003103
246015
Actinomycetota
GTG
His
>WENV181108759
OEEJ01000259
239204
Actinomycetota
CTT
Lys
>WENV181108758
OEEJ01000259
239204
Actinomycetota
CTT
Lys
>WENV181109008
OEEJ01003082
392594
Actinomycetota
GAC
Val
>WENV181108928
OEEJ01001315
392594
Actinomycetota
GAC
Val
>WENV181108465
OEEJ01000026
148467
Actinomycetota
CAT
Met
>WENV181108464
OEEJ01000026
148467
Actinomycetota
CAT
Met
>WENV181109133
OEEJ01008235
246299
Actinomycetota
CTT
Lys
>WENV181109169
OEEJ01012093
246222
Actinomycetota
CCG
Arg
>WENV181108729
OEEJ01000221
42714
Actinomycetota
GAG
Leu
>WENV181109105
OEEJ01007077
152190
Actinomycetota
GAT
Ile
>WENV181109132
OEEJ01008108
162402
Actinomycetota
GGG
Pro
>WENV181109003
OEEJ01002995
162402
Actinomycetota
GGG
Pro
>WENV181108472
OEEJ01000028
293092
Actinomycetota
CTC
Glu
>WENV181108424
OEEJ01000021
293092
Actinomycetota
CTC
Glu
>WENV181108970
OEEJ01002124
59716
Actinomycetota
CAG
Leu
>WENV181109159
OEEJ01011283
246365
Actinomycetota
ACG
Arg
>WENV181109511
OEEJ01097046
240124
Actinomycetota
CGT
Thr
>WENV181109233
OEEJ01016771
240124
Actinomycetota
CGT
Thr
>WENV181109356
OEEJ01030905
377770
Actinomycetota
CTG
Gln
>WENV181109494
OEEJ01088129
388111
Actinomycetota
>WENV181109391
OEEJ01040740
154637
Actinomycetota
CAA
Leu
>WENV181109152
OEEJ01010752
344380
Actinomycetota
GAC
Val
>WENV181109246
OEEJ01017266
412870
Actinomycetota
TCC
Gly
>WENV181109290
OEEJ01020931
241408
Actinomycetota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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