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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181119833
OEFJ01000182
243647
Bacillota
TTT
Lys
>WENV181120120
OEFJ01005482
156958
Bacillota
GAT
Ile
>WENV181120178
OEFJ01009242
342730
Bacillota
CTC
Glu
>WENV181120179
OEFJ01009242
342730
Bacillota
CTC
Glu
>WENV181119920
OEFJ01000536
235693
Bacillota
GGT
Thr
>WENV181120204
OEFJ01010433
148348
Bacillota
GTC
Asp
>WENV181120259
OEFJ01014651
243099
Bacillota
GTT
Asn
>WENV181120355
OEFJ01045175
16834
Bacillota
GCT
Ser
>WENV181119737
OEFJ01000029
16834
Bacillota
GCT
Ser
>WENV181120205
OEFJ01010433
239076
Bacillota
GAA
Phe
>WENV181119832
OEFJ01000182
243646
Bacillota
GTT
Asn
>WENV181119828
OEFJ01000182
243646
Bacillota
GTT
Asn
>WENV181119788
OEFJ01000098
114002
Bacillota
CAA
Leu
>WENV181119793
OEFJ01000098
37437
Bacillota
TAA
Leu
>WENV181120214
OEFJ01010864
340265
Bacillota
GCC
Gly
>WENV181120098
OEFJ01005067
162028
Bacillota
ACG
Arg
>WENV181120409
OEFJ01076124
113951
Bacillota
GTA
Tyr
>WENV181120108
OEFJ01005067
113951
Bacillota
GTA
Tyr
>WENV181119994
OEFJ01001429
113951
Bacillota
GTA
Tyr
>WENV181119835
OEFJ01000182
243612
Bacillota
TAC
Val
>WENV181119830
OEFJ01000182
243612
Bacillota
TAC
Val
>WENV181120209
OEFJ01010433
81382
Bacillota
GAG
Leu
>WENV181120192
OEFJ01009674
338676
Bacillota
CCG
Arg
>WENV181120156
OEFJ01007938
81373
Bacillota
GTA
Tyr
>WENV181119923
OEFJ01000544
147135
Bacillota
ACG
Arg
>WENV181120106
OEFJ01005067
242848
Bacillota
GAA
Phe
>WENV181119871
OEFJ01000283
242848
Bacillota
GAA
Phe
>WENV181119848
OEFJ01000203
242848
Bacillota
GAA
Phe
>WENV181119804
OEFJ01000113
342895
Bacillota
CAT
Met
>WENV181120312
OEFJ01022952
241471
Bacillota
TGC
Ala
>WENV181120310
OEFJ01022893
241471
Bacillota
TGC
Ala
>WENV181120306
OEFJ01022128
241471
Bacillota
TGC
Ala
>WENV181120101
OEFJ01005067
148057
Bacillota
CAT
Met
>WENV181120285
OEFJ01019361
96694
Bacillota
TAG
Leu
>WENV181120307
OEFJ01022128
152019
Bacillota
GAT
Ile
>WENV181120127
OEFJ01006306
241526
Bacillota
CTT
Lys
>WENV181120200
OEFJ01010101
147183
Bacillota
GTT
Asn
>WENV181119991
OEFJ01001429
147183
Bacillota
GTT
Asn
>WENV181119867
OEFJ01000283
147183
Bacillota
GTT
Asn
>WENV181119844
OEFJ01000203
147183
Bacillota
GTT
Asn
>WENV181119765
OEFJ01000068
243613
Bacillota
GTG
His
>WENV181120148
OEFJ01007197
127572
Bacillota
ACG
Arg
>WENV181120094
OEFJ01005067
256920
Bacillota
TTT
Lys
>WENV181119996
OEFJ01001429
256920
Bacillota
TTT
Lys
>WENV181119971
OEFJ01001150
256920
Bacillota
TTT
Lys
>WENV181119921
OEFJ01000536
152491
Bacillota
CAT
Met
>WENV181120304
OEFJ01022059
241638
Bacillota
GTG
His
>WENV181120076
OEFJ01004002
152018
Bacillota
CCT
Arg
>WENV181120210
OEFJ01010433
81598
Bacillota
CAG
Leu
>WENV181119912
OEFJ01000483
151836
Bacillota
TCT
Arg
>WENV181119887
OEFJ01000356
151836
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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