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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
30 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181157144
OEIG01000507
242888
Fusobacteriota
GTT
Asn
>WENV181157889
OEIG01046097
242888
Fusobacteriota
GTT
Asn
>WENV181157983
OEIG01072293
151858
Fusobacteriota
GAT
Ile
>WENV181157203
OEIG01000795
151860
Fusobacteriota
ACG
Arg
>WENV181157235
OEIG01000984
151857
Fusobacteriota
TCT
Arg
>WENV181157269
OEIG01001382
156827
Fusobacteriota
GTC
Asp
>WENV181157276
OEIG01001382
156827
Fusobacteriota
GTC
Asp
>WENV181157278
OEIG01001382
115931
Fusobacteriota
TAG
Leu
>WENV181157486
OEIG01007878
115931
Fusobacteriota
TAG
Leu
>WENV181157277
OEIG01001382
242889
Fusobacteriota
TGT
Thr
>WENV181157256
OEIG01001288
242889
Fusobacteriota
TGT
Thr
>WENV181157204
OEIG01000795
60218
Fusobacteriota
CAA
Leu
>WENV181157484
OEIG01007878
296648
Fusobacteriota
GTG
His
>WENV181157273
OEIG01001382
242891
Fusobacteriota
CTT
Lys
>WENV181157984
OEIG01072293
151855
Fusobacteriota
TGC
Ala
>WENV181157279
OEIG01001382
151855
Fusobacteriota
TGC
Ala
>WENV181157236
OEIG01000984
127801
Fusobacteriota
CAT
Met
>WENV181157482
OEIG01007878
151854
Fusobacteriota
TGG
Pro
>WENV181157281
OEIG01001382
151854
Fusobacteriota
TGG
Pro
>WENV181157485
OEIG01007878
248546
Fusobacteriota
TTT
Lys
>WENV181157234
OEIG01000984
248546
Fusobacteriota
TTT
Lys
>WENV181157274
OEIG01001382
377837
Fusobacteriota
TTC
Glu
>WENV181157257
OEIG01001288
377837
Fusobacteriota
TTC
Glu
>WENV181157237
OEIG01000984
377837
Fusobacteriota
TTC
Glu
>WENV181157271
OEIG01001382
415120
Fusobacteriota
GCA
Cys
>WENV181157369
OEIG01002859
37553
Fusobacteriota
GCT
Ser
>WENV181157238
OEIG01000984
113955
Fusobacteriota
>WENV181157231
OEIG01000984
45759
Fusobacteriota
TAA
Leu
>WENV181157415
OEIG01004073
151861
Fusobacteriota
CCT
Arg
>WENV181157280
OEIG01001382
200772
Fusobacteriota
CAT
Met
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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