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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
14 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181157717
OEIG01023636
81880
Gammaproteobacteria
GAG
Leu
>WENV181158078
OEIG01117960
81880
Gammaproteobacteria
GAG
Leu
>WENV181157836
OEIG01037457
30640
Gammaproteobacteria
GGA
Ser
>WENV181158053
OEIG01105476
432288
Gammaproteobacteria
GCA
Cys
>WENV181157071
OEIG01000318
3276
Gammaproteobacteria
>WENV181157715
OEIG01023609
3276
Gammaproteobacteria
>WENV181157596
OEIG01013885
80672
Gammaproteobacteria
GAG
Leu
>WENV181157155
OEIG01000592
3972
Gammaproteobacteria
GCT
Ser
>WENV181157344
OEIG01002476
3247
Gammaproteobacteria
GCT
Ser
>WENV181158129
OEIG01165642
58828
Gammaproteobacteria
TAA
Leu
>WENV181156908
OEIG01000002
146713
Gammaproteobacteria
GAC
Val
>WENV181157110
OEIG01000419
268376
Gammaproteobacteria
CTT
Lys
>WENV181157626
OEIG01016351
90409
Gammaproteobacteria
CAA
Leu
>WENV181156974
OEIG01000031
90409
Gammaproteobacteria
CAA
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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