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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181158815
OEIH01010980
242888
Fusobacteriota
GTT
Asn
>WENV181159353
OEIH01200346
151858
Fusobacteriota
GAT
Ile
>WENV181158862
OEIH01013289
151860
Fusobacteriota
ACG
Arg
>WENV181158981
OEIH01025704
151857
Fusobacteriota
TCT
Arg
>WENV181158937
OEIH01019452
144694
Fusobacteriota
CAT
Met
>WENV181159275
OEIH01132423
152483
Fusobacteriota
GTC
Asp
>WENV181159080
OEIH01042347
246241
Fusobacteriota
TGC
Ala
>WENV181159101
OEIH01046850
343015
Fusobacteriota
TTG
Gln
>WENV181158861
OEIH01013289
155082
Fusobacteriota
TCG
Arg
>WENV181158711
OEIH01006914
242889
Fusobacteriota
TGT
Thr
>WENV181159348
OEIH01199761
60218
Fusobacteriota
CAA
Leu
>WENV181158763
OEIH01008935
242891
Fusobacteriota
CTT
Lys
>WENV181159354
OEIH01200346
151855
Fusobacteriota
TGC
Ala
>WENV181158936
OEIH01019452
151855
Fusobacteriota
TGC
Ala
>WENV181158983
OEIH01025704
342642
Fusobacteriota
TTC
Glu
>WENV181158764
OEIH01008935
342642
Fusobacteriota
TTC
Glu
>WENV181158712
OEIH01006914
342642
Fusobacteriota
TTC
Glu
>WENV181158982
OEIH01025704
127801
Fusobacteriota
CAT
Met
>WENV181158865
OEIH01013420
242887
Fusobacteriota
GTG
His
>WENV181159355
OEIH01200449
235188
Fusobacteriota
TTT
Lys
>WENV181158980
OEIH01025704
235188
Fusobacteriota
TTT
Lys
>WENV181159141
OEIH01062461
151854
Fusobacteriota
TGG
Pro
>WENV181159076
OEIH01041437
151854
Fusobacteriota
TGG
Pro
>WENV181158863
OEIH01013420
151854
Fusobacteriota
TGG
Pro
>WENV181158842
OEIH01012632
151854
Fusobacteriota
TGG
Pro
>WENV181158768
OEIH01009068
37553
Fusobacteriota
GCT
Ser
>WENV181158984
OEIH01025704
113955
Fusobacteriota
>WENV181158767
OEIH01009068
113955
Fusobacteriota
>WENV181158977
OEIH01025704
45759
Fusobacteriota
TAA
Leu
>WENV181159356
OEIH01200449
113605
Fusobacteriota
TAG
Leu
>WENV181158934
OEIH01019452
113605
Fusobacteriota
TAG
Leu
>WENV181158971
OEIH01024500
151861
Fusobacteriota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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