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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181184321
OEJW01153808
144589
Actinomycetota
ACG
Arg
>WENV181184027
OEJW01034581
411601
Actinomycetota
CCC
Gly
>WENV181184266
OEJW01123096
23370
Actinomycetota
GCT
Ser
>WENV181183872
OEJW01013341
235174
Actinomycetota
TGC
Ala
>WENV181183781
OEJW01005790
235101
Actinomycetota
TTT
Lys
>WENV181184325
OEJW01155918
356045
Actinomycetota
GAC
Val
>WENV181183807
OEJW01007605
145423
Actinomycetota
TCT
Arg
>WENV181183901
OEJW01014825
153948
Actinomycetota
GGG
Pro
>WENV181184291
OEJW01134185
44855
Actinomycetota
TGA
Ser
>WENV181183898
OEJW01014722
145345
Actinomycetota
TAC
Val
>WENV181184239
OEJW01108308
235199
Actinomycetota
CAC
Val
>WENV181183831
OEJW01009213
254857
Actinomycetota
CCG
Arg
>WENV181183881
OEJW01013671
144700
Actinomycetota
CAT
Met
>WENV181183911
OEJW01015560
44942
Actinomycetota
TGA
Ser
>WENV181183964
OEJW01022154
238473
Actinomycetota
GTG
His
>WENV181184039
OEJW01038115
144636
Actinomycetota
GAT
Ile
>WENV181184167
OEJW01072822
338148
Actinomycetota
CTG
Gln
>WENV181184334
OEJW01156095
235148
Actinomycetota
GTT
Asn
>WENV181184122
OEJW01059846
235148
Actinomycetota
GTT
Asn
>WENV181183825
OEJW01008546
53078
Actinomycetota
GGA
Ser
>WENV181184287
OEJW01132321
144825
Actinomycetota
CAT
Met
>WENV181184236
OEJW01106890
338139
Actinomycetota
GTT
Asn
>WENV181183824
OEJW01008534
411554
Actinomycetota
CCC
Gly
>WENV181183939
OEJW01020005
414234
Actinomycetota
CTG
Gln
>WENV181183913
OEJW01015994
145269
Actinomycetota
CAT
Met
>WENV181184014
OEJW01031306
235121
Actinomycetota
CGT
Thr
>WENV181184098
OEJW01054586
17009
Actinomycetota
GAG
Leu
>WENV181184170
OEJW01073159
80622
Actinomycetota
CAG
Leu
>WENV181184076
OEJW01050548
158513
Actinomycetota
TGG
Pro
>WENV181184302
OEJW01141985
235173
Actinomycetota
GGC
Ala
>WENV181184188
OEJW01078595
144660
Actinomycetota
TAC
Val
>WENV181183880
OEJW01013671
95593
Actinomycetota
>WENV181184202
OEJW01084936
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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