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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181195938
OEQV01003218
238673
Bacteroidota
GAA
Phe
>WENV181195909
OEQV01001718
165001
Bacteroidota
GTT
Asn
>WENV181195907
OEQV01001682
145315
Bacteroidota
CAT
Met
>WENV181195955
OEQV01004841
412440
Bacteroidota
GCA
Cys
>WENV181195968
OEQV01006367
168744
Bacteroidota
GTG
His
>WENV181195890
OEQV01000983
104003
Bacteroidota
TAG
Leu
>WENV181195952
OEQV01004193
340605
Bacteroidota
TTC
Glu
>WENV181195891
OEQV01000983
238670
Bacteroidota
GCC
Gly
>WENV181195905
OEQV01001582
33336
Bacteroidota
GGA
Ser
>WENV181195893
OEQV01000997
139214
Bacteroidota
TAC
Val
>WENV181195923
OEQV01001982
412494
Bacteroidota
CCA
Trp
>WENV181195939
OEQV01003597
147941
Bacteroidota
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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