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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1035066
SRR035089.230205
95664
Cyanobacteriota
GAG
Leu
>SRA1036382
SRR035089.507515
411836
Cyanobacteriota
TCC
Gly
>SRA1034294
SRR035089.51207
339061
Cyanobacteriota
CAC
Val
>SRA1034955
SRR035089.206037
58999
Cyanobacteriota
CAG
Leu
>SRA1034884
SRR035089.191162
58999
Cyanobacteriota
CAG
Leu
>SRA1035384
SRR035089.294654
236930
Cyanobacteriota
CGC
Ala
>SRA1035999
SRR035089.424043
237009
Cyanobacteriota
GGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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