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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
188 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1054650
SRR035099.181707
236662
Chlorobiota
GGT
Thr
>SRA1054652
SRR035099.181905
236662
Chlorobiota
GGT
Thr
>SRA1054659
SRR035099.182850
236662
Chlorobiota
GGT
Thr
>SRA1054685
SRR035099.188520
236662
Chlorobiota
GGT
Thr
>SRA1054700
SRR035099.190338
236662
Chlorobiota
GGT
Thr
>SRA1054747
SRR035099.205446
236662
Chlorobiota
GGT
Thr
>SRA1054760
SRR035099.207667
236662
Chlorobiota
GGT
Thr
>SRA1054845
SRR035099.228704
236662
Chlorobiota
GGT
Thr
>SRA1053923
SRR035099.1654
236662
Chlorobiota
GGT
Thr
>SRA1053957
SRR035099.16422
236662
Chlorobiota
GGT
Thr
>SRA1054176
SRR035099.76427
236662
Chlorobiota
GGT
Thr
>SRA1054359
SRR035099.115116
236662
Chlorobiota
GGT
Thr
>SRA1054376
SRR035099.118584
236662
Chlorobiota
GGT
Thr
>SRA1054529
SRR035099.156388
236662
Chlorobiota
GGT
Thr
>SRA1054531
SRR035099.156465
236662
Chlorobiota
GGT
Thr
>SRA1054548
SRR035099.159830
236662
Chlorobiota
GGT
Thr
>SRA1054564
SRR035099.164290
236662
Chlorobiota
GGT
Thr
>SRA1054592
SRR035099.169747
236662
Chlorobiota
GGT
Thr
>SRA1054610
SRR035099.172210
236662
Chlorobiota
GGT
Thr
>SRA1054231
SRR035099.89155
146381
Chlorobiota
CAT
Met
>SRA1054327
SRR035099.107773
146381
Chlorobiota
CAT
Met
>SRA1054388
SRR035099.120914
146381
Chlorobiota
CAT
Met
>SRA1054392
SRR035099.122921
146381
Chlorobiota
CAT
Met
>SRA1054552
SRR035099.160760
146381
Chlorobiota
CAT
Met
>SRA1054033
SRR035099.38386
80756
Chlorobiota
GTA
Tyr
>SRA1054079
SRR035099.52193
80756
Chlorobiota
GTA
Tyr
>SRA1054175
SRR035099.76427
80756
Chlorobiota
GTA
Tyr
>SRA1054256
SRR035099.93112
80756
Chlorobiota
GTA
Tyr
>SRA1054358
SRR035099.115116
80756
Chlorobiota
GTA
Tyr
>SRA1054375
SRR035099.118584
80756
Chlorobiota
GTA
Tyr
>SRA1054563
SRR035099.164290
80756
Chlorobiota
GTA
Tyr
>SRA1054591
SRR035099.169747
80756
Chlorobiota
GTA
Tyr
>SRA1054609
SRR035099.172210
80756
Chlorobiota
GTA
Tyr
>SRA1054649
SRR035099.181707
80756
Chlorobiota
GTA
Tyr
>SRA1054658
SRR035099.182850
80756
Chlorobiota
GTA
Tyr
>SRA1054684
SRR035099.188520
80756
Chlorobiota
GTA
Tyr
>SRA1054699
SRR035099.190338
80756
Chlorobiota
GTA
Tyr
>SRA1054746
SRR035099.205446
80756
Chlorobiota
GTA
Tyr
>SRA1054759
SRR035099.207667
80756
Chlorobiota
GTA
Tyr
>SRA1054844
SRR035099.228704
80756
Chlorobiota
GTA
Tyr
>SRA1053931
SRR035099.5925
238645
Chlorobiota
GGC
Ala
>SRA1053986
SRR035099.26383
238645
Chlorobiota
GGC
Ala
>SRA1054107
SRR035099.58840
238645
Chlorobiota
GGC
Ala
>SRA1054264
SRR035099.95412
238645
Chlorobiota
GGC
Ala
>SRA1054567
SRR035099.164908
238645
Chlorobiota
GGC
Ala
>SRA1054597
SRR035099.170439
238645
Chlorobiota
GGC
Ala
>SRA1054628
SRR035099.177609
238645
Chlorobiota
GGC
Ala
>SRA1054639
SRR035099.180799
238645
Chlorobiota
GGC
Ala
>SRA1054671
SRR035099.185166
238645
Chlorobiota
GGC
Ala
>SRA1054713
SRR035099.193874
238645
Chlorobiota
GGC
Ala
>SRA1054784
SRR035099.212367
238645
Chlorobiota
GGC
Ala
>SRA1054840
SRR035099.228179
238645
Chlorobiota
GGC
Ala
>SRA1053970
SRR035099.20027
236753
Chlorobiota
TGG
Pro
>SRA1054311
SRR035099.104370
236753
Chlorobiota
TGG
Pro
>SRA1054456
SRR035099.135712
236753
Chlorobiota
TGG
Pro
>SRA1054492
SRR035099.146170
236753
Chlorobiota
TGG
Pro
>SRA1054605
SRR035099.171252
236753
Chlorobiota
TGG
Pro
>SRA1054781
SRR035099.210938
236753
Chlorobiota
TGG
Pro
>SRA1054792
SRR035099.215356
236753
Chlorobiota
TGG
Pro
>SRA1054871
SRR035099.241314
236753
Chlorobiota
TGG
Pro
>SRA1054058
SRR035099.44950
236833
Chlorobiota
CGT
Thr
>SRA1054173
SRR035099.75635
236833
Chlorobiota
CGT
Thr
>SRA1054417
SRR035099.129362
236833
Chlorobiota
CGT
Thr
>SRA1054496
SRR035099.146460
236833
Chlorobiota
CGT
Thr
>SRA1054641
SRR035099.181544
236833
Chlorobiota
CGT
Thr
>SRA1054003
SRR035099.31181
146232
Chlorobiota
GGG
Pro
>SRA1054036
SRR035099.39261
146232
Chlorobiota
GGG
Pro
>SRA1054048
SRR035099.43552
146232
Chlorobiota
GGG
Pro
>SRA1054109
SRR035099.59181
146232
Chlorobiota
GGG
Pro
>SRA1054278
SRR035099.98600
146232
Chlorobiota
GGG
Pro
>SRA1054827
SRR035099.224168
146232
Chlorobiota
GGG
Pro
>SRA1054103
SRR035099.57663
236741
Chlorobiota
CCG
Arg
>SRA1054250
SRR035099.92469
236741
Chlorobiota
CCG
Arg
>SRA1054385
SRR035099.120700
236741
Chlorobiota
CCG
Arg
>SRA1054390
SRR035099.121407
236741
Chlorobiota
CCG
Arg
>SRA1054440
SRR035099.133547
236741
Chlorobiota
CCG
Arg
>SRA1054601
SRR035099.171058
236741
Chlorobiota
CCG
Arg
>SRA1054634
SRR035099.180282
236741
Chlorobiota
CCG
Arg
>SRA1054715
SRR035099.194092
236741
Chlorobiota
CCG
Arg
>SRA1054232
SRR035099.89155
236933
Chlorobiota
CCC
Gly
>SRA1054244
SRR035099.91592
236933
Chlorobiota
CCC
Gly
>SRA1054389
SRR035099.120914
236933
Chlorobiota
CCC
Gly
>SRA1054395
SRR035099.123341
236933
Chlorobiota
CCC
Gly
>SRA1054640
SRR035099.181264
237026
Chlorobiota
CGG
Pro
>SRA1054104
SRR035099.57663
237026
Chlorobiota
CGG
Pro
>SRA1054166
SRR035099.74421
237026
Chlorobiota
CGG
Pro
>SRA1054386
SRR035099.120700
237026
Chlorobiota
CGG
Pro
>SRA1054441
SRR035099.133547
237026
Chlorobiota
CGG
Pro
>SRA1054602
SRR035099.171058
237026
Chlorobiota
CGG
Pro
>SRA1054635
SRR035099.180282
237026
Chlorobiota
CGG
Pro
>SRA1054098
SRR035099.56248
95795
Chlorobiota
CAG
Leu
>SRA1054318
SRR035099.105520
95795
Chlorobiota
CAG
Leu
>SRA1054436
SRR035099.132884
95795
Chlorobiota
CAG
Leu
>SRA1054442
SRR035099.133879
95795
Chlorobiota
CAG
Leu
>SRA1054499
SRR035099.146768
95795
Chlorobiota
CAG
Leu
>SRA1054170
SRR035099.75098
95795
Chlorobiota
CAG
Leu
>SRA1053922
SRR035099.1062
339069
Chlorobiota
TTG
Gln
>SRA1053930
SRR035099.5335
339069
Chlorobiota
TTG
Gln
>SRA1053977
SRR035099.23114
339069
Chlorobiota
TTG
Gln
>SRA1053978
SRR035099.23147
339069
Chlorobiota
TTG
Gln
>SRA1053992
SRR035099.26827
339069
Chlorobiota
TTG
Gln
>SRA1054073
SRR035099.50476
339069
Chlorobiota
TTG
Gln
>SRA1054086
SRR035099.53918
339069
Chlorobiota
TTG
Gln
>SRA1054159
SRR035099.71831
339069
Chlorobiota
TTG
Gln
>SRA1054350
SRR035099.114580
339069
Chlorobiota
TTG
Gln
>SRA1054416
SRR035099.129230
339069
Chlorobiota
TTG
Gln
>SRA1054424
SRR035099.131267
339069
Chlorobiota
TTG
Gln
>SRA1054575
SRR035099.167311
339069
Chlorobiota
TTG
Gln
>SRA1054584
SRR035099.167991
339069
Chlorobiota
TTG
Gln
>SRA1053987
SRR035099.26555
236827
Chlorobiota
TTT
Lys
>SRA1054145
SRR035099.69803
236827
Chlorobiota
TTT
Lys
>SRA1054351
SRR035099.114707
236827
Chlorobiota
TTT
Lys
>SRA1054511
SRR035099.150241
236827
Chlorobiota
TTT
Lys
>SRA1054542
SRR035099.158870
236827
Chlorobiota
TTT
Lys
>SRA1054766
SRR035099.208392
236827
Chlorobiota
TTT
Lys
>SRA1054851
SRR035099.231543
236827
Chlorobiota
TTT
Lys
>SRA1054868
SRR035099.239222
236827
Chlorobiota
TTT
Lys
>SRA1054286
SRR035099.100189
126816
Chlorobiota
GTC
Asp
>SRA1054345
SRR035099.111395
126816
Chlorobiota
GTC
Asp
>SRA1054366
SRR035099.116255
126816
Chlorobiota
GTC
Asp
>SRA1054588
SRR035099.169159
126816
Chlorobiota
GTC
Asp
>SRA1054623
SRR035099.175780
126816
Chlorobiota
GTC
Asp
>SRA1054693
SRR035099.189538
126816
Chlorobiota
GTC
Asp
>SRA1053988
SRR035099.26555
95811
Chlorobiota
GAG
Leu
>SRA1054146
SRR035099.69803
95811
Chlorobiota
GAG
Leu
>SRA1054352
SRR035099.114707
95811
Chlorobiota
GAG
Leu
>SRA1054470
SRR035099.138983
95811
Chlorobiota
GAG
Leu
>SRA1054512
SRR035099.150241
95811
Chlorobiota
GAG
Leu
>SRA1054543
SRR035099.158870
95811
Chlorobiota
GAG
Leu
>SRA1054767
SRR035099.208392
95811
Chlorobiota
GAG
Leu
>SRA1054804
SRR035099.217673
95811
Chlorobiota
GAG
Leu
>SRA1054852
SRR035099.231543
95811
Chlorobiota
GAG
Leu
>SRA1054869
SRR035099.239222
95811
Chlorobiota
GAG
Leu
>SRA1053981
SRR035099.25175
95811
Chlorobiota
GAG
Leu
>SRA1053936
SRR035099.8665
146165
Chlorobiota
GTG
His
>SRA1054148
SRR035099.69952
146165
Chlorobiota
GTG
His
>SRA1054152
SRR035099.70291
146165
Chlorobiota
GTG
His
>SRA1054669
SRR035099.184825
146165
Chlorobiota
GTG
His
>SRA1054034
SRR035099.38386
236663
Chlorobiota
CCA
Trp
>SRA1054177
SRR035099.76427
236663
Chlorobiota
CCA
Trp
>SRA1054220
SRR035099.86314
236663
Chlorobiota
CCA
Trp
>SRA1054254
SRR035099.93040
236663
Chlorobiota
CCA
Trp
>SRA1054308
SRR035099.103664
236663
Chlorobiota
CCA
Trp
>SRA1054360
SRR035099.115116
236663
Chlorobiota
CCA
Trp
>SRA1054530
SRR035099.156388
236663
Chlorobiota
CCA
Trp
>SRA1054549
SRR035099.159830
236663
Chlorobiota
CCA
Trp
>SRA1054593
SRR035099.169747
236663
Chlorobiota
CCA
Trp
>SRA1054653
SRR035099.181905
236663
Chlorobiota
CCA
Trp
>SRA1054660
SRR035099.182850
236663
Chlorobiota
CCA
Trp
>SRA1054686
SRR035099.188520
236663
Chlorobiota
CCA
Trp
>SRA1054748
SRR035099.205446
236663
Chlorobiota
CCA
Trp
>SRA1054846
SRR035099.228704
236663
Chlorobiota
CCA
Trp
>SRA1054080
SRR035099.52354
146283
Chlorobiota
TAC
Val
>SRA1054116
SRR035099.61985
146283
Chlorobiota
TAC
Val
>SRA1054141
SRR035099.68754
146283
Chlorobiota
TAC
Val
>SRA1054187
SRR035099.80065
146283
Chlorobiota
TAC
Val
>SRA1054294
SRR035099.100826
146283
Chlorobiota
TAC
Val
>SRA1054336
SRR035099.108393
146283
Chlorobiota
TAC
Val
>SRA1054418
SRR035099.129377
146283
Chlorobiota
TAC
Val
>SRA1054474
SRR035099.139987
146283
Chlorobiota
TAC
Val
>SRA1054479
SRR035099.141335
146283
Chlorobiota
TAC
Val
>SRA1054503
SRR035099.148171
146283
Chlorobiota
TAC
Val
>SRA1054565
SRR035099.164502
146283
Chlorobiota
TAC
Val
>SRA1054620
SRR035099.175014
146283
Chlorobiota
TAC
Val
>SRA1054796
SRR035099.216630
146283
Chlorobiota
TAC
Val
>SRA1054870
SRR035099.240728
146283
Chlorobiota
TAC
Val
>SRA1054297
SRR035099.100972
235782
Chlorobiota
CAT
Met
>SRA1054377
SRR035099.118635
235782
Chlorobiota
CAT
Met
>SRA1054872
SRR035099.242385
235782
Chlorobiota
CAT
Met
>SRA1053928
SRR035099.4232
235782
Chlorobiota
CAT
Met
>SRA1053929
SRR035099.4710
235782
Chlorobiota
CAT
Met
>SRA1053941
SRR035099.9991
235782
Chlorobiota
CAT
Met
>SRA1053943
SRR035099.10703
235782
Chlorobiota
CAT
Met
>SRA1054000
SRR035099.30629
235782
Chlorobiota
CAT
Met
>SRA1054040
SRR035099.40292
235782
Chlorobiota
CAT
Met
>SRA1054051
SRR035099.43638
235782
Chlorobiota
CAT
Met
>SRA1054092
SRR035099.54458
235782
Chlorobiota
CAT
Met
>SRA1054111
SRR035099.59467
235782
Chlorobiota
CAT
Met
>SRA1054736
SRR035099.201881
236974
Chlorobiota
TGC
Ala
>SRA1054413
SRR035099.128778
236974
Chlorobiota
TGC
Ala
>SRA1054009
SRR035099.33878
236974
Chlorobiota
TGC
Ala
>SRA1054277
SRR035099.97766
236974
Chlorobiota
TGC
Ala
>SRA1054303
SRR035099.102524
236974
Chlorobiota
TGC
Ala
>SRA1054341
SRR035099.109643
236974
Chlorobiota
TGC
Ala
>SRA1054451
SRR035099.135142
236974
Chlorobiota
TGC
Ala
>SRA1054473
SRR035099.139719
236974
Chlorobiota
TGC
Ala
>SRA1054708
SRR035099.191305
236974
Chlorobiota
TGC
Ala
>SRA1054668
SRR035099.184825
147907
Chlorobiota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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