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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180019440
FTBV01002378
226192
Betaproteobacteria
GGG
Pro
>WENV180019420
FTBV01002052
301701
Betaproteobacteria
GTG
His
>WENV180019369
FTBV01000145
185257
Betaproteobacteria
CAT
Met
>WENV180019416
FTBV01002034
185257
Betaproteobacteria
CAT
Met
>WENV180019426
FTBV01002167
73401
Betaproteobacteria
TAG
Leu
>WENV180019389
FTBV01000851
100103
Betaproteobacteria
GTA
Tyr
>WENV180019387
FTBV01000797
198132
Betaproteobacteria
CAT
Met
>WENV180019392
FTBV01000899
198132
Betaproteobacteria
CAT
Met
>WENV180019395
FTBV01001024
198132
Betaproteobacteria
CAT
Met
>WENV180019424
FTBV01002123
198132
Betaproteobacteria
CAT
Met
>WENV180019431
FTBV01002231
178096
Betaproteobacteria
TCT
Arg
>WENV180019391
FTBV01000851
414048
Betaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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