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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170133706
CENU01045091
360947
Alphaproteobacteria
TTT
Lys
>WENV170135650
CENU01267227
399001
Alphaproteobacteria
GAC
Val
>WENV170135274
CENU01191915
424450
Alphaproteobacteria
GGT
Thr
>WENV170133543
CENU01031820
201940
Alphaproteobacteria
CAT
Met
>WENV170133854
CENU01058026
201940
Alphaproteobacteria
CAT
Met
>WENV170134530
CENU01116536
201940
Alphaproteobacteria
CAT
Met
>WENV170135281
CENU01192635
201940
Alphaproteobacteria
CAT
Met
>WENV170133519
CENU01030780
191064
Alphaproteobacteria
CCG
Arg
>WENV170133910
CENU01061434
481268
Alphaproteobacteria
TCC
Gly
>WENV170135525
CENU01204432
305403
Alphaproteobacteria
>WENV170135271
CENU01191704
234690
Alphaproteobacteria
CGG
Pro
>WENV170133863
CENU01059030
436046
Alphaproteobacteria
GAC
Val
>WENV170135560
CENU01205079
317915
Alphaproteobacteria
GAA
Phe
>WENV170134083
CENU01076970
435083
Alphaproteobacteria
>WENV170135799
CENU01345589
210458
Alphaproteobacteria
CGG
Pro
>WENV170135326
CENU01195910
400544
Alphaproteobacteria
GGT
Thr
>WENV170133439
CENU01026113
229804
Alphaproteobacteria
GTC
Asp
>WENV170133481
CENU01029001
427428
Alphaproteobacteria
GCC
Gly
>WENV170135554
CENU01205022
176490
Alphaproteobacteria
CAT
Met
>WENV170133868
CENU01059409
212319
Alphaproteobacteria
GTG
His
>WENV170134344
CENU01097463
228432
Alphaproteobacteria
TGG
Pro
>WENV170133923
CENU01062426
488318
Alphaproteobacteria
TCC
Gly
>WENV170133555
CENU01032664
178237
Alphaproteobacteria
CAT
Met
>WENV170133037
CENU01000552
338616
Alphaproteobacteria
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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