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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170193442
CEPH01082643
282745
Alphaproteobacteria
TAC
Val
>WENV170193346
CEPH01064948
207217
Alphaproteobacteria
CCG
Arg
>WENV170193282
CEPH01046667
20437
Alphaproteobacteria
GGA
Ser
>WENV170193130
CEPH01018701
201940
Alphaproteobacteria
CAT
Met
>WENV170193266
CEPH01043731
201940
Alphaproteobacteria
CAT
Met
>WENV170193527
CEPH01105364
284697
Alphaproteobacteria
GAA
Phe
>WENV170193430
CEPH01080665
400518
Alphaproteobacteria
GAA
Phe
>WENV170193439
CEPH01082157
178263
Alphaproteobacteria
GTG
His
>WENV170193321
CEPH01059430
400530
Alphaproteobacteria
GAC
Val
>WENV170193563
CEPH01136133
298628
Alphaproteobacteria
CCA
Trp
>WENV170193487
CEPH01086457
288727
Alphaproteobacteria
>WENV170193373
CEPH01070402
178731
Alphaproteobacteria
GTC
Asp
>WENV170193113
CEPH01013469
400516
Alphaproteobacteria
TTG
Gln
>WENV170193606
CEPH01158648
431636
Alphaproteobacteria
CTC
Glu
>WENV170193363
CEPH01068408
454954
Alphaproteobacteria
CAC
Val
>WENV170193303
CEPH01053773
183632
Alphaproteobacteria
GGG
Pro
>WENV170193239
CEPH01035540
121250
Alphaproteobacteria
TAG
Leu
>WENV170193412
CEPH01078972
121250
Alphaproteobacteria
TAG
Leu
>WENV170193482
CEPH01086351
178733
Alphaproteobacteria
CAT
Met
>WENV170193381
CEPH01072416
427571
Alphaproteobacteria
GCC
Gly
>WENV170193272
CEPH01045027
29610
Alphaproteobacteria
TGA
Ser
>WENV170193325
CEPH01060346
192275
Alphaproteobacteria
GTG
His
>WENV170193494
CEPH01086813
400517
Alphaproteobacteria
GGT
Thr
>WENV170193427
CEPH01080477
481098
Alphaproteobacteria
CTG
Gln
>WENV170193405
CEPH01077910
301758
Alphaproteobacteria
GAA
Phe
>WENV170193286
CEPH01048397
403581
Alphaproteobacteria
TTG
Gln
>WENV170193337
CEPH01062488
178736
Alphaproteobacteria
CCT
Arg
>WENV170193263
CEPH01043387
233665
Alphaproteobacteria
CCT
Arg
>WENV170193431
CEPH01080795
282981
Alphaproteobacteria
CCA
Trp
>WENV170193260
CEPH01042165
481099
Alphaproteobacteria
TCC
Gly
>WENV170193297
CEPH01052511
481099
Alphaproteobacteria
TCC
Gly
>WENV170193388
CEPH01073981
184816
Alphaproteobacteria
GTG
His
>WENV170193124
CEPH01015641
29739
Alphaproteobacteria
CGA
Ser
>WENV170193112
CEPH01013085
282980
Alphaproteobacteria
TGT
Thr
>WENV170193434
CEPH01080933
13606
Alphaproteobacteria
GCT
Ser
>WENV170193254
CEPH01039466
366050
Alphaproteobacteria
CGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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