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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170200968
CEPP01020279
218644
Alphaproteobacteria
ACG
Arg
>WENV170200940
CEPP01016656
296698
Alphaproteobacteria
CGC
Ala
>WENV170201041
CEPP01060408
73374
Alphaproteobacteria
CAG
Leu
>WENV170200915
CEPP01013426
282589
Alphaproteobacteria
GGC
Ala
>WENV170200861
CEPP01001621
304182
Alphaproteobacteria
CTT
Lys
>WENV170200859
CEPP01001620
188967
Alphaproteobacteria
TTT
Lys
>WENV170201009
CEPP01043850
179429
Alphaproteobacteria
CCT
Arg
>WENV170200901
CEPP01008438
412163
Alphaproteobacteria
GGT
Thr
>WENV170201083
CEPP01071521
178815
Alphaproteobacteria
GGG
Pro
>WENV170200923
CEPP01015337
454954
Alphaproteobacteria
CAC
Val
>WENV170200949
CEPP01018533
427571
Alphaproteobacteria
GCC
Gly
>WENV170201130
CEPP01078642
400186
Alphaproteobacteria
GTT
Asn
>WENV170200975
CEPP01022215
118213
Alphaproteobacteria
TAG
Leu
>WENV170200936
CEPP01016016
480946
Alphaproteobacteria
TTG
Gln
>WENV170201098
CEPP01076398
13311
Alphaproteobacteria
GCT
Ser
>WENV170200953
CEPP01019327
296763
Alphaproteobacteria
CCA
Trp
>WENV170200900
CEPP01008438
184816
Alphaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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