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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183716866
PDWJ01000230
381459
Alphaproteobacteria
CAC
Val
>WENV183717025
PDWJ01000385
381459
Alphaproteobacteria
CAC
Val
>WENV183719446
PDWJ01014300
381459
Alphaproteobacteria
CAC
Val
>WENV183716592
PDWJ01000063
365250
Alphaproteobacteria
GCC
Gly
>WENV183717046
PDWJ01000404
365250
Alphaproteobacteria
GCC
Gly
>WENV183720321
PDWJ01031471
365250
Alphaproteobacteria
GCC
Gly
>WENV183717354
PDWJ01000785
148200
Alphaproteobacteria
TGG
Pro
>WENV183720339
PDWJ01031876
148200
Alphaproteobacteria
TGG
Pro
>WENV183716590
PDWJ01000063
237739
Alphaproteobacteria
CGT
Thr
>WENV183717567
PDWJ01001131
435870
Alphaproteobacteria
GCA
Cys
>WENV183717024
PDWJ01000385
34696
Alphaproteobacteria
GGA
Ser
>WENV183716895
PDWJ01000246
306070
Alphaproteobacteria
CCA
Trp
>WENV183721864
PDWJ01091618
113700
Alphaproteobacteria
>WENV183719598
PDWJ01016980
113700
Alphaproteobacteria
>WENV183717060
PDWJ01000417
113700
Alphaproteobacteria
>WENV183716593
PDWJ01000063
113700
Alphaproteobacteria
>WENV183717279
PDWJ01000682
109657
Alphaproteobacteria
TAG
Leu
>WENV183717053
PDWJ01000412
109657
Alphaproteobacteria
TAG
Leu
>WENV183716416
PDWJ01000002
109657
Alphaproteobacteria
TAG
Leu
>WENV183722402
PDWJ01125500
23468
Alphaproteobacteria
GCT
Ser
>WENV183720011
PDWJ01024643
23468
Alphaproteobacteria
GCT
Ser
>WENV183718993
PDWJ01008526
23468
Alphaproteobacteria
GCT
Ser
>WENV183718599
PDWJ01005291
23468
Alphaproteobacteria
GCT
Ser
>WENV183718477
PDWJ01004327
23468
Alphaproteobacteria
GCT
Ser
>WENV183717195
PDWJ01000562
23468
Alphaproteobacteria
GCT
Ser
>WENV183716420
PDWJ01000002
23468
Alphaproteobacteria
GCT
Ser
>WENV183718130
PDWJ01002520
282595
Alphaproteobacteria
CCA
Trp
>WENV183716589
PDWJ01000063
282595
Alphaproteobacteria
CCA
Trp
>WENV183719709
PDWJ01018981
239119
Alphaproteobacteria
CGT
Thr
>WENV183719206
PDWJ01010738
239119
Alphaproteobacteria
CGT
Thr
>WENV183722559
PDWJ01138646
338282
Alphaproteobacteria
GTT
Asn
>WENV183722411
PDWJ01126794
338282
Alphaproteobacteria
GTT
Asn
>WENV183721784
PDWJ01086033
338282
Alphaproteobacteria
GTT
Asn
>WENV183721297
PDWJ01063146
338282
Alphaproteobacteria
GTT
Asn
>WENV183720039
PDWJ01025239
338282
Alphaproteobacteria
GTT
Asn
>WENV183719138
PDWJ01010095
338282
Alphaproteobacteria
GTT
Asn
>WENV183718457
PDWJ01004189
338282
Alphaproteobacteria
GTT
Asn
>WENV183717766
PDWJ01001557
338282
Alphaproteobacteria
GTT
Asn
>WENV183716538
PDWJ01000042
338282
Alphaproteobacteria
GTT
Asn
>WENV183716476
PDWJ01000018
338282
Alphaproteobacteria
GTT
Asn
>WENV183720522
PDWJ01036196
147083
Alphaproteobacteria
GGG
Pro
>WENV183717091
PDWJ01000454
147083
Alphaproteobacteria
GGG
Pro
>WENV183716438
PDWJ01000008
147083
Alphaproteobacteria
GGG
Pro
>WENV183716584
PDWJ01000058
340220
Alphaproteobacteria
TTC
Glu
>WENV183722090
PDWJ01105129
307050
Alphaproteobacteria
GGC
Ala
>WENV183722089
PDWJ01105129
307050
Alphaproteobacteria
GGC
Ala
>WENV183719396
PDWJ01013772
307050
Alphaproteobacteria
GGC
Ala
>WENV183719395
PDWJ01013772
307050
Alphaproteobacteria
GGC
Ala
>WENV183717465
PDWJ01000958
307050
Alphaproteobacteria
GGC
Ala
>WENV183716419
PDWJ01000002
307050
Alphaproteobacteria
GGC
Ala
>WENV183716413
PDWJ01000002
340288
Alphaproteobacteria
GCC
Gly
>WENV183716414
PDWJ01000002
147879
Alphaproteobacteria
TGG
Pro
>WENV183716712
PDWJ01000150
25760
Alphaproteobacteria
CGA
Ser
>WENV183720957
PDWJ01050522
237740
Alphaproteobacteria
TTT
Lys
>WENV183720341
PDWJ01031922
237740
Alphaproteobacteria
TTT
Lys
>WENV183719971
PDWJ01024087
237740
Alphaproteobacteria
TTT
Lys
>WENV183719970
PDWJ01024086
237740
Alphaproteobacteria
TTT
Lys
>WENV183717785
PDWJ01001625
237740
Alphaproteobacteria
TTT
Lys
>WENV183716477
PDWJ01000020
237740
Alphaproteobacteria
TTT
Lys
>WENV183719137
PDWJ01010095
147334
Alphaproteobacteria
CAT
Met
>WENV183716864
PDWJ01000230
147334
Alphaproteobacteria
CAT
Met
>WENV183718526
PDWJ01004665
147876
Alphaproteobacteria
TCT
Arg
>WENV183716877
PDWJ01000234
338757
Alphaproteobacteria
GAC
Val
>WENV183717888
PDWJ01001877
28682
Alphaproteobacteria
GGA
Ser
>WENV183719358
PDWJ01012942
161002
Alphaproteobacteria
GTG
His
>WENV183718050
PDWJ01002269
161002
Alphaproteobacteria
GTG
His
>WENV183717651
PDWJ01001320
148083
Alphaproteobacteria
ACG
Arg
>WENV183717061
PDWJ01000421
148083
Alphaproteobacteria
ACG
Arg
>WENV183722672
PDWJ01147190
59164
Alphaproteobacteria
GAG
Leu
>WENV183716767
PDWJ01000174
59164
Alphaproteobacteria
GAG
Leu
>WENV183722238
PDWJ01114018
23648
Alphaproteobacteria
CGA
Ser
>WENV183720963
PDWJ01050736
23648
Alphaproteobacteria
CGA
Ser
>WENV183718914
PDWJ01007672
23648
Alphaproteobacteria
CGA
Ser
>WENV183717051
PDWJ01000412
23648
Alphaproteobacteria
CGA
Ser
>WENV183716490
PDWJ01000026
23648
Alphaproteobacteria
CGA
Ser
>WENV183719454
PDWJ01014381
254387
Alphaproteobacteria
TTT
Lys
>WENV183718315
PDWJ01003316
254387
Alphaproteobacteria
TTT
Lys
>WENV183718081
PDWJ01002334
254387
Alphaproteobacteria
TTT
Lys
>WENV183717443
PDWJ01000927
254387
Alphaproteobacteria
TTT
Lys
>WENV183716488
PDWJ01000024
284043
Alphaproteobacteria
CGT
Thr
>WENV183716905
PDWJ01000256
348781
Alphaproteobacteria
GAA
Phe
>WENV183720116
PDWJ01026816
163860
Alphaproteobacteria
GGG
Pro
>WENV183717639
PDWJ01001268
163860
Alphaproteobacteria
GGG
Pro
>WENV183716764
PDWJ01000171
163860
Alphaproteobacteria
GGG
Pro
>WENV183717026
PDWJ01000385
147085
Alphaproteobacteria
CCG
Arg
>WENV183720850
PDWJ01047277
338760
Alphaproteobacteria
GAA
Phe
>WENV183720433
PDWJ01034308
338760
Alphaproteobacteria
GAA
Phe
>WENV183718561
PDWJ01004905
338760
Alphaproteobacteria
GAA
Phe
>WENV183718143
PDWJ01002570
338760
Alphaproteobacteria
GAA
Phe
>WENV183716698
PDWJ01000139
338760
Alphaproteobacteria
GAA
Phe
>WENV183716870
PDWJ01000232
237196
Alphaproteobacteria
CGT
Thr
>WENV183716586
PDWJ01000058
147087
Alphaproteobacteria
GTG
His
>WENV183720890
PDWJ01048560
319925
Alphaproteobacteria
TGT
Thr
>WENV183719390
PDWJ01013628
319925
Alphaproteobacteria
TGT
Thr
>WENV183717625
PDWJ01001238
319925
Alphaproteobacteria
TGT
Thr
>WENV183717049
PDWJ01000412
319925
Alphaproteobacteria
TGT
Thr
>WENV183716415
PDWJ01000002
427621
Alphaproteobacteria
TCC
Gly
>WENV183716491
PDWJ01000026
254524
Alphaproteobacteria
TAC
Val
>WENV183722698
PDWJ01148814
339606
Alphaproteobacteria
>WENV183721947
PDWJ01096123
339606
Alphaproteobacteria
>WENV183721187
PDWJ01058140
339606
Alphaproteobacteria
>WENV183721104
PDWJ01055423
339606
Alphaproteobacteria
>WENV183719504
PDWJ01015363
339606
Alphaproteobacteria
>WENV183719021
PDWJ01008908
339606
Alphaproteobacteria
>WENV183717468
PDWJ01000962
339606
Alphaproteobacteria
>WENV183716417
PDWJ01000002
339606
Alphaproteobacteria
>WENV183716585
PDWJ01000058
339609
Alphaproteobacteria
GGT
Thr
>WENV183716409
PDWJ01000001
339609
Alphaproteobacteria
GGT
Thr
>WENV183722692
PDWJ01148467
412424
Alphaproteobacteria
TCC
Gly
>WENV183717418
PDWJ01000902
412424
Alphaproteobacteria
TCC
Gly
>WENV183717057
PDWJ01000414
412424
Alphaproteobacteria
TCC
Gly
>WENV183717637
PDWJ01001268
154579
Alphaproteobacteria
GTG
His
>WENV183716591
PDWJ01000063
127020
Alphaproteobacteria
TCT
Arg
>WENV183721071
PDWJ01054196
236256
Alphaproteobacteria
TAC
Val
>WENV183717037
PDWJ01000399
236256
Alphaproteobacteria
TAC
Val
>WENV183721459
PDWJ01070700
147088
Alphaproteobacteria
CCT
Arg
>WENV183720784
PDWJ01045344
147088
Alphaproteobacteria
CCT
Arg
>WENV183719207
PDWJ01010765
147088
Alphaproteobacteria
CCT
Arg
>WENV183719120
PDWJ01009883
147088
Alphaproteobacteria
CCT
Arg
>WENV183716817
PDWJ01000208
147088
Alphaproteobacteria
CCT
Arg
>WENV183716411
PDWJ01000001
147088
Alphaproteobacteria
CCT
Arg
>WENV183721384
PDWJ01066473
113767
Alphaproteobacteria
>WENV183720320
PDWJ01031471
113767
Alphaproteobacteria
>WENV183718924
PDWJ01007718
426627
Alphaproteobacteria
TCC
Gly
>WENV183720633
PDWJ01040112
426627
Alphaproteobacteria
TCC
Gly
>WENV183719444
PDWJ01014257
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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