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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
56 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183727150
PJTO01007453
266516
Alphaproteobacteria
TAC
Val
>WENV183727040
PJTO01002289
338523
Alphaproteobacteria
CGT
Thr
>WENV183726784
PJTO01000169
426418
Alphaproteobacteria
CTG
Gln
>WENV183727356
PJTO01033365
59382
Alphaproteobacteria
CAG
Leu
>WENV183727123
PJTO01005983
96238
Alphaproteobacteria
GAG
Leu
>WENV183727421
PJTO01051389
95686
Alphaproteobacteria
TAG
Leu
>WENV183727073
PJTO01003596
237800
Alphaproteobacteria
>WENV183727396
PJTO01042333
235844
Alphaproteobacteria
CGC
Ala
>WENV183727419
PJTO01051381
237489
Alphaproteobacteria
CAT
Met
>WENV183727005
PJTO01001622
237489
Alphaproteobacteria
CAT
Met
>WENV183727177
PJTO01010202
267922
Alphaproteobacteria
CCA
Trp
>WENV183727301
PJTO01024891
146965
Alphaproteobacteria
CGG
Pro
>WENV183727045
PJTO01002633
147152
Alphaproteobacteria
ACG
Arg
>WENV183727359
PJTO01033798
338524
Alphaproteobacteria
CAC
Val
>WENV183727352
PJTO01032695
411726
Alphaproteobacteria
GCA
Cys
>WENV183727094
PJTO01004369
59373
Alphaproteobacteria
CAG
Leu
>WENV183726985
PJTO01001273
31286
Alphaproteobacteria
GGA
Ser
>WENV183727181
PJTO01010495
148279
Alphaproteobacteria
TCT
Arg
>WENV183726698
PJTO01000079
256971
Alphaproteobacteria
TGT
Thr
>WENV183727348
PJTO01032424
145498
Alphaproteobacteria
TGG
Pro
>WENV183727384
PJTO01039323
412459
Alphaproteobacteria
CTG
Gln
>WENV183726705
PJTO01000082
185767
Alphaproteobacteria
CCG
Arg
>WENV183727007
PJTO01001674
31506
Alphaproteobacteria
TGA
Ser
>WENV183726723
PJTO01000106
31506
Alphaproteobacteria
TGA
Ser
>WENV183727090
PJTO01004308
235839
Alphaproteobacteria
GTG
His
>WENV183727055
PJTO01002941
119536
Alphaproteobacteria
TAG
Leu
>WENV183727250
PJTO01017630
239295
Alphaproteobacteria
CAT
Met
>WENV183727278
PJTO01021887
339454
Alphaproteobacteria
>WENV183727281
PJTO01022265
338496
Alphaproteobacteria
CAT
Met
>WENV183726624
PJTO01000033
383873
Alphaproteobacteria
>WENV183727186
PJTO01010868
80626
Alphaproteobacteria
GTA
Tyr
>WENV183727014
PJTO01001806
339495
Alphaproteobacteria
>WENV183727425
PJTO01053781
378976
Alphaproteobacteria
GAC
Val
>WENV183727153
PJTO01007834
378976
Alphaproteobacteria
GAC
Val
>WENV183727155
PJTO01007923
145342
Alphaproteobacteria
TCT
Arg
>WENV183727183
PJTO01010567
96898
Alphaproteobacteria
CAA
Leu
>WENV183727154
PJTO01007923
126683
Alphaproteobacteria
TGG
Pro
>WENV183726920
PJTO01000579
237281
Alphaproteobacteria
CGT
Thr
>WENV183727130
PJTO01006085
411642
Alphaproteobacteria
GCA
Cys
>WENV183727189
PJTO01011103
23392
Alphaproteobacteria
GGA
Ser
>WENV183727022
PJTO01002017
260015
Alphaproteobacteria
CTC
Glu
>WENV183727272
PJTO01020627
238730
Alphaproteobacteria
TTT
Lys
>WENV183726816
PJTO01000198
10657
Alphaproteobacteria
GCT
Ser
>WENV183727169
PJTO01009696
338622
Alphaproteobacteria
GTT
Asn
>WENV183726685
PJTO01000066
338622
Alphaproteobacteria
GTT
Asn
>WENV183727251
PJTO01017675
144972
Alphaproteobacteria
>WENV183727092
PJTO01004326
188632
Alphaproteobacteria
GAT
Ile
>WENV183727303
PJTO01025037
145340
Alphaproteobacteria
CCT
Arg
>WENV183727231
PJTO01016244
154227
Alphaproteobacteria
CAT
Met
>WENV183727110
PJTO01005092
23789
Alphaproteobacteria
TGA
Ser
>WENV183726970
PJTO01000973
428521
Alphaproteobacteria
CTG
Gln
>WENV183727114
PJTO01005455
16278
Alphaproteobacteria
GGA
Ser
>WENV183727036
PJTO01002134
101826
Alphaproteobacteria
TAG
Leu
>WENV183727111
PJTO01005274
237579
Alphaproteobacteria
CTT
Lys
>WENV183726761
PJTO01000134
343498
Alphaproteobacteria
GGT
Thr
>WENV183726826
PJTO01000215
426627
Alphaproteobacteria
TCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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