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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
35 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729947
PJTR01000231
96238
Alphaproteobacteria
GAG
Leu
>WENV183730263
PJTR01009675
23394
Alphaproteobacteria
CGA
Ser
>WENV183729886
PJTR01000146
29895
Alphaproteobacteria
TGA
Ser
>WENV183729882
PJTR01000145
306070
Alphaproteobacteria
CCA
Trp
>WENV183729707
PJTR01000026
58865
Alphaproteobacteria
GAG
Leu
>WENV183730054
PJTR01000427
193550
Alphaproteobacteria
TCT
Arg
>WENV183729758
PJTR01000056
147152
Alphaproteobacteria
ACG
Arg
>WENV183729757
PJTR01000056
147152
Alphaproteobacteria
ACG
Arg
>WENV183729816
PJTR01000094
191197
Alphaproteobacteria
CCG
Arg
>WENV183729806
PJTR01000089
146683
Alphaproteobacteria
GTG
His
>WENV183729864
PJTR01000138
31286
Alphaproteobacteria
GGA
Ser
>WENV183729906
PJTR01000170
401702
Alphaproteobacteria
>WENV183729971
PJTR01000274
165860
Alphaproteobacteria
TGG
Pro
>WENV183729677
PJTR01000011
239035
Alphaproteobacteria
CGC
Ala
>WENV183729708
PJTR01000026
236134
Alphaproteobacteria
TAC
Val
>WENV183730265
PJTR01010036
23620
Alphaproteobacteria
GCT
Ser
>WENV183729805
PJTR01000089
108283
Alphaproteobacteria
CAA
Leu
>WENV183730176
PJTR01002090
339454
Alphaproteobacteria
>WENV183729950
PJTR01000231
339495
Alphaproteobacteria
>WENV183730356
PJTR01031025
417050
Alphaproteobacteria
CCC
Gly
>WENV183729785
PJTR01000074
24459
Alphaproteobacteria
CGA
Ser
>WENV183729961
PJTR01000243
97145
Alphaproteobacteria
TAG
Leu
>WENV183729741
PJTR01000040
173246
Alphaproteobacteria
CCT
Arg
>WENV183729958
PJTR01000242
239037
Alphaproteobacteria
TTT
Lys
>WENV183730261
PJTR01009347
75256
Alphaproteobacteria
CAG
Leu
>WENV183730284
PJTR01014531
10657
Alphaproteobacteria
GCT
Ser
>WENV183729829
PJTR01000100
10657
Alphaproteobacteria
GCT
Ser
>WENV183729804
PJTR01000089
80837
Alphaproteobacteria
TAA
Leu
>WENV183730156
PJTR01001535
338622
Alphaproteobacteria
GTT
Asn
>WENV183730055
PJTR01000432
338622
Alphaproteobacteria
GTT
Asn
>WENV183730277
PJTR01013112
144969
Alphaproteobacteria
CGG
Pro
>WENV183729899
PJTR01000162
428521
Alphaproteobacteria
CTG
Gln
>WENV183730238
PJTR01006578
95631
Alphaproteobacteria
TAG
Leu
>WENV183729907
PJTR01000172
237579
Alphaproteobacteria
CTT
Lys
>WENV183730264
PJTR01009825
147013
Alphaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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