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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
23 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180987821
ODVK01165235
183998
Betaproteobacteria
>WENV180987033
ODVK01003526
282645
Betaproteobacteria
GCC
Gly
>WENV180987866
ODVK01194735
282645
Betaproteobacteria
GCC
Gly
>WENV180987570
ODVK01044422
73563
Betaproteobacteria
CAG
Leu
>WENV180986934
ODVK01002187
285019
Betaproteobacteria
CCT
Arg
>WENV180986612
ODVK01000165
280600
Betaproteobacteria
TGT
Thr
>WENV180986613
ODVK01000165
280600
Betaproteobacteria
TGT
Thr
>WENV180987561
ODVK01042520
180972
Betaproteobacteria
GAC
Val
>WENV180987125
ODVK01005076
118105
Betaproteobacteria
CAA
Leu
>WENV180986600
ODVK01000144
178781
Betaproteobacteria
TCT
Arg
>WENV180987717
ODVK01093142
281524
Betaproteobacteria
GAA
Phe
>WENV180987372
ODVK01018402
175971
Betaproteobacteria
GTC
Asp
>WENV180986772
ODVK01000745
187637
Betaproteobacteria
>WENV180986742
ODVK01000584
400529
Betaproteobacteria
CCT
Arg
>WENV180987318
ODVK01013889
100191
Betaproteobacteria
GAG
Leu
>WENV180986590
ODVK01000125
74694
Betaproteobacteria
CAG
Leu
>WENV180986643
ODVK01000255
74694
Betaproteobacteria
CAG
Leu
>WENV180986620
ODVK01000182
20442
Betaproteobacteria
GGA
Ser
>WENV180986875
ODVK01001546
280601
Betaproteobacteria
TTG
Gln
>WENV180986876
ODVK01001546
280601
Betaproteobacteria
TTG
Gln
>WENV180987527
ODVK01036406
30096
Betaproteobacteria
TAA
Leu
>WENV180987060
ODVK01004220
118514
Betaproteobacteria
TAG
Leu
>WENV180987441
ODVK01024654
292371
Betaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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