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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
17 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183729238
PJTQ01014311
296910
Betaproteobacteria
GCC
Gly
>WENV183728504
PJTQ01000090
146768
Betaproteobacteria
CAT
Met
>WENV183728505
PJTQ01000090
146768
Betaproteobacteria
CAT
Met
>WENV183729348
PJTQ01025714
290456
Betaproteobacteria
GTT
Asn
>WENV183728335
PJTQ01000019
340345
Betaproteobacteria
CCT
Arg
>WENV183729357
PJTQ01026786
147332
Betaproteobacteria
CAT
Met
>WENV183729616
PJTQ01092056
145695
Betaproteobacteria
GGG
Pro
>WENV183729602
PJTQ01087070
253695
Betaproteobacteria
TTT
Lys
>WENV183729506
PJTQ01055354
146726
Betaproteobacteria
TCT
Arg
>WENV183729456
PJTQ01041941
237457
Betaproteobacteria
TGT
Thr
>WENV183728568
PJTQ01000140
147855
Betaproteobacteria
TTG
Gln
>WENV183728471
PJTQ01000064
253278
Betaproteobacteria
TTT
Lys
>WENV183728470
PJTQ01000064
253278
Betaproteobacteria
TTT
Lys
>WENV183728334
PJTQ01000019
253278
Betaproteobacteria
TTT
Lys
>WENV183728484
PJTQ01000073
161511
Betaproteobacteria
TCT
Arg
>WENV183729394
PJTQ01034180
144934
Betaproteobacteria
TTG
Gln
>WENV183729375
PJTQ01029989
254339
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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