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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183780572
PPYF01172210
152473
Fusobacteriota
CAT
Met
>WENV183780486
PPYF01171779
152471
Fusobacteriota
TGG
Pro
>WENV183780548
PPYF01172064
152471
Fusobacteriota
TGG
Pro
>WENV183780594
PPYF01172461
144666
Fusobacteriota
TCG
Arg
>WENV183780528
PPYF01171873
61286
Fusobacteriota
CAA
Leu
>WENV183780628
PPYF01173417
156827
Fusobacteriota
GTC
Asp
>WENV183780695
PPYF01175619
156827
Fusobacteriota
GTC
Asp
>WENV183780522
PPYF01171833
144694
Fusobacteriota
CAT
Met
>WENV183780539
PPYF01171946
144694
Fusobacteriota
CAT
Met
>WENV183780567
PPYF01172203
144694
Fusobacteriota
CAT
Met
>WENV183780699
PPYF01175755
144694
Fusobacteriota
CAT
Met
>WENV183780631
PPYF01173417
242889
Fusobacteriota
TGT
Thr
>WENV183780692
PPYF01175619
251254
Fusobacteriota
CTT
Lys
>WENV183780504
PPYF01171794
3405
Fusobacteriota
>WENV183780536
PPYF01171934
61285
Fusobacteriota
GAG
Leu
>WENV183780633
PPYF01173417
96990
Fusobacteriota
GTA
Tyr
>WENV183780449
PPYF01171728
82287
Fusobacteriota
CAG
Leu
>WENV183780566
PPYF01172203
248601
Fusobacteriota
TGC
Ala
>WENV183780521
PPYF01171833
248601
Fusobacteriota
TGC
Ala
>WENV183777717
PPYF01108696
242887
Fusobacteriota
GTG
His
>WENV183780424
PPYF01171701
114254
Fusobacteriota
TGA
Ser
>WENV183780425
PPYF01171701
17193
Fusobacteriota
GCT
Ser
>WENV183777715
PPYF01108696
151854
Fusobacteriota
TGG
Pro
>WENV183777718
PPYF01108696
248546
Fusobacteriota
TTT
Lys
>WENV183780721
PPYF01177013
156835
Fusobacteriota
CCT
Arg
>WENV183780630
PPYF01173417
415120
Fusobacteriota
GCA
Cys
>WENV183780569
PPYF01172210
45759
Fusobacteriota
TAA
Leu
>WENV183777719
PPYF01108696
113605
Fusobacteriota
TAG
Leu
>WENV183780693
PPYF01175619
346237
Fusobacteriota
TTC
Glu
>WENV183780632
PPYF01173417
346237
Fusobacteriota
TTC
Glu
>WENV183780591
PPYF01172400
346237
Fusobacteriota
TTC
Glu
>WENV183780573
PPYF01172210
346237
Fusobacteriota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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