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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
240 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170578193
FUFK010004398
452599
Gammaproteobacteria
TAC
Val
>WENV170578194
FUFK010004398
271613
Gammaproteobacteria
GTC
Asp
>WENV170578228
FUFK010011493
503285
Gammaproteobacteria
TTT
Lys
>WENV170578388
FUFK010016430
452605
Gammaproteobacteria
GGC
Ala
>WENV170578389
FUFK010016430
452604
Gammaproteobacteria
TTC
Glu
>WENV170578413
FUFK010016894
452603
Gammaproteobacteria
CCA
Trp
>WENV170578429
FUFK010017050
452599
Gammaproteobacteria
TAC
Val
>WENV170578430
FUFK010017050
271613
Gammaproteobacteria
GTC
Asp
>WENV170578465
FUFK010017266
452601
Gammaproteobacteria
TTT
Lys
>WENV170578496
FUFK010017593
276972
Gammaproteobacteria
CCA
Trp
>WENV170578558
FUFK010019228
451641
Gammaproteobacteria
CGT
Thr
>WENV170578691
FUFK010023574
452599
Gammaproteobacteria
TAC
Val
>WENV170578750
FUFK010033868
270695
Gammaproteobacteria
CGG
Pro
>WENV170578845
FUFK010037422
271286
Gammaproteobacteria
CAT
Met
>WENV170578846
FUFK010037422
181084
Gammaproteobacteria
TAG
Leu
>WENV170578847
FUFK010037422
458352
Gammaproteobacteria
TTG
Gln
>WENV170578855
FUFK010037444
276185
Gammaproteobacteria
TGG
Pro
>WENV170578860
FUFK010037447
457453
Gammaproteobacteria
TTT
Lys
>WENV170578861
FUFK010037452
451982
Gammaproteobacteria
GGC
Ala
>WENV170578862
FUFK010037452
459479
Gammaproteobacteria
TTC
Glu
>WENV170578969
FUFK010037659
467367
Gammaproteobacteria
GGT
Thr
>WENV170579048
FUFK010037828
271611
Gammaproteobacteria
TGG
Pro
>WENV170579050
FUFK010037828
452598
Gammaproteobacteria
GTG
His
>WENV170579218
FUFK010038315
180112
Gammaproteobacteria
TAG
Leu
>WENV170579219
FUFK010038315
452599
Gammaproteobacteria
TAC
Val
>WENV170579220
FUFK010038315
271613
Gammaproteobacteria
GTC
Asp
>WENV170579418
FUFK010038944
452597
Gammaproteobacteria
TTG
Gln
>WENV170579419
FUFK010038944
452597
Gammaproteobacteria
TTG
Gln
>WENV170579420
FUFK010038944
46525
Gammaproteobacteria
GCT
Ser
>WENV170579421
FUFK010038944
274723
Gammaproteobacteria
ACG
Arg
>WENV170579525
FUFK010039483
452605
Gammaproteobacteria
GGC
Ala
>WENV170579526
FUFK010039483
452604
Gammaproteobacteria
TTC
Glu
>WENV170579583
FUFK010039859
180112
Gammaproteobacteria
TAG
Leu
>WENV170579627
FUFK010040095
452599
Gammaproteobacteria
TAC
Val
>WENV170579628
FUFK010040095
271613
Gammaproteobacteria
GTC
Asp
>WENV170579845
FUFK010041731
452605
Gammaproteobacteria
GGC
Ala
>WENV170579846
FUFK010041731
452604
Gammaproteobacteria
TTC
Glu
>WENV170579907
FUFK010042446
271617
Gammaproteobacteria
GGG
Pro
>WENV170579909
FUFK010042446
452607
Gammaproteobacteria
TGT
Thr
>WENV170579910
FUFK010042446
218041
Gammaproteobacteria
GTA
Tyr
>WENV170579911
FUFK010042446
779641
Gammaproteobacteria
TCC
Gly
>WENV170579912
FUFK010042446
655603
Gammaproteobacteria
GGT
Thr
>WENV170579940
FUFK010042567
271616
Gammaproteobacteria
CAT
Met
>WENV170580007
FUFK010043303
271616
Gammaproteobacteria
CAT
Met
>WENV170580043
FUFK010043833
452599
Gammaproteobacteria
TAC
Val
>WENV170580044
FUFK010043833
271613
Gammaproteobacteria
GTC
Asp
>WENV170580071
FUFK010044046
452607
Gammaproteobacteria
TGT
Thr
>WENV170580072
FUFK010044046
218041
Gammaproteobacteria
GTA
Tyr
>WENV170580073
FUFK010044046
779641
Gammaproteobacteria
TCC
Gly
>WENV170580074
FUFK010044046
655603
Gammaproteobacteria
GGT
Thr
>WENV170580075
FUFK010044046
271617
Gammaproteobacteria
GGG
Pro
>WENV170580092
FUFK010044222
276971
Gammaproteobacteria
ACG
Arg
>WENV170580138
FUFK010044562
270690
Gammaproteobacteria
CAT
Met
>WENV170580194
FUFK010044901
274150
Gammaproteobacteria
CAT
Met
>WENV170580425
FUFK010046317
452605
Gammaproteobacteria
GGC
Ala
>WENV170580426
FUFK010046317
452604
Gammaproteobacteria
TTC
Glu
>WENV170580448
FUFK010046512
180112
Gammaproteobacteria
TAG
Leu
>WENV170580523
FUFK010047209
457171
Gammaproteobacteria
GTT
Asn
>WENV170580536
FUFK010047373
452604
Gammaproteobacteria
TTC
Glu
>WENV170580540
FUFK010047409
452603
Gammaproteobacteria
CCA
Trp
>WENV170580643
FUFK010048920
271616
Gammaproteobacteria
CAT
Met
>WENV170580658
FUFK010049198
291681
Gammaproteobacteria
GAT
Ile
>WENV170580659
FUFK010049198
452602
Gammaproteobacteria
TGC
Ala
>WENV170580661
FUFK010049239
467367
Gammaproteobacteria
GGT
Thr
>WENV170580954
FUFK010055103
459731
Gammaproteobacteria
GGT
Thr
>WENV170581335
FUFK010061380
452601
Gammaproteobacteria
TTT
Lys
>WENV170581378
FUFK010061920
452603
Gammaproteobacteria
CCA
Trp
>WENV170581471
FUFK010063855
453897
Gammaproteobacteria
TAC
Val
>WENV170581487
FUFK010064264
451982
Gammaproteobacteria
GGC
Ala
>WENV170581488
FUFK010064264
459479
Gammaproteobacteria
TTC
Glu
>WENV170581718
FUFK010066801
271611
Gammaproteobacteria
TGG
Pro
>WENV170581720
FUFK010066801
452598
Gammaproteobacteria
GTG
His
>WENV170581874
FUFK010069246
459731
Gammaproteobacteria
GGT
Thr
>WENV170582211
FUFK010076652
271253
Gammaproteobacteria
CAT
Met
>WENV170582536
FUFK010085771
655603
Gammaproteobacteria
GGT
Thr
>WENV170582586
FUFK010094032
87214
Gammaproteobacteria
GGA
Ser
>WENV170582626
FUFK010102377
453897
Gammaproteobacteria
TAC
Val
>WENV170582671
FUFK010106567
45684
Gammaproteobacteria
GCT
Ser
>WENV170582672
FUFK010106567
270694
Gammaproteobacteria
ACG
Arg
>WENV170583183
FUFK010125489
452599
Gammaproteobacteria
TAC
Val
>WENV170583184
FUFK010125489
271613
Gammaproteobacteria
GTC
Asp
>WENV170583187
FUFK010125702
270700
Gammaproteobacteria
GAT
Ile
>WENV170583188
FUFK010125835
452599
Gammaproteobacteria
TAC
Val
>WENV170583189
FUFK010125835
271613
Gammaproteobacteria
GTC
Asp
>WENV170583200
FUFK010126574
273754
Gammaproteobacteria
GTT
Asn
>WENV170583409
FUFK010136659
271464
Gammaproteobacteria
TGG
Pro
>WENV170583410
FUFK010136659
284350
Gammaproteobacteria
TCT
Arg
>WENV170583933
FUFK010176131
271611
Gammaproteobacteria
TGG
Pro
>WENV170583935
FUFK010176131
452598
Gammaproteobacteria
GTG
His
>WENV170583989
FUFK010181546
45684
Gammaproteobacteria
GCT
Ser
>WENV170583990
FUFK010181546
270694
Gammaproteobacteria
ACG
Arg
>WENV170584010
FUFK010183671
276972
Gammaproteobacteria
CCA
Trp
>WENV170584086
FUFK010189543
270692
Gammaproteobacteria
CAT
Met
>WENV170584091
FUFK010189803
179944
Gammaproteobacteria
GAG
Leu
>WENV170584094
FUFK010189902
271617
Gammaproteobacteria
GGG
Pro
>WENV170584106
FUFK010191951
653473
Gammaproteobacteria
TTG
Gln
>WENV170584132
FUFK010194697
271388
Gammaproteobacteria
ACG
Arg
>WENV170584219
FUFK010199164
451982
Gammaproteobacteria
GGC
Ala
>WENV170584220
FUFK010199164
459479
Gammaproteobacteria
TTC
Glu
>WENV170584260
FUFK010200761
276972
Gammaproteobacteria
CCA
Trp
>WENV170584296
FUFK010204596
271616
Gammaproteobacteria
CAT
Met
>WENV170585105
FUFK010261344
456510
Gammaproteobacteria
GGC
Ala
>WENV170585451
FUFK010292865
271616
Gammaproteobacteria
CAT
Met
>WENV170585542
FUFK010300091
452603
Gammaproteobacteria
CCA
Trp
>WENV170585609
FUFK010307171
271617
Gammaproteobacteria
GGG
Pro
>WENV170585667
FUFK010312908
467367
Gammaproteobacteria
GGT
Thr
>WENV170585733
FUFK010320799
46551
Gammaproteobacteria
TGA
Ser
>WENV170585830
FUFK010331496
291681
Gammaproteobacteria
GAT
Ile
>WENV170585831
FUFK010331496
452602
Gammaproteobacteria
TGC
Ala
>WENV170586333
FUFK010398066
452598
Gammaproteobacteria
GTG
His
>WENV170586386
FUFK010404523
279555
Gammaproteobacteria
CAT
Met
>WENV170586387
FUFK010404523
181084
Gammaproteobacteria
TAG
Leu
>WENV170586388
FUFK010404523
458352
Gammaproteobacteria
TTG
Gln
>WENV170586455
FUFK010418188
454968
Gammaproteobacteria
TAC
Val
>WENV170586456
FUFK010418188
273852
Gammaproteobacteria
GTC
Asp
>WENV170586556
FUFK010426728
276975
Gammaproteobacteria
TGG
Pro
>WENV170586879
FUFK010450860
274723
Gammaproteobacteria
ACG
Arg
>WENV170587108
FUFK010467899
467367
Gammaproteobacteria
GGT
Thr
>WENV170587131
FUFK010468980
46525
Gammaproteobacteria
GCT
Ser
>WENV170587373
FUFK010487614
270982
Gammaproteobacteria
GAT
Ile
>WENV170587617
FUFK010505562
452601
Gammaproteobacteria
TTT
Lys
>WENV170588164
FUFK010545267
460378
Gammaproteobacteria
TAC
Val
>WENV170588282
FUFK010550894
452604
Gammaproteobacteria
TTC
Glu
>WENV170588410
FUFK010560098
465223
Gammaproteobacteria
GGT
Thr
>WENV170589507
FUFK010647588
780241
Gammaproteobacteria
GCA
Cys
>WENV170589578
FUFK010653892
459731
Gammaproteobacteria
GGT
Thr
>WENV170589639
FUFK010658107
271613
Gammaproteobacteria
GTC
Asp
>WENV170589699
FUFK010661457
452599
Gammaproteobacteria
TAC
Val
>WENV170589771
FUFK010667201
274150
Gammaproteobacteria
CAT
Met
>WENV170589983
FUFK010683403
281115
Gammaproteobacteria
GAT
Ile
>WENV170590218
FUFK010703844
271464
Gammaproteobacteria
TGG
Pro
>WENV170590382
FUFK010717915
453897
Gammaproteobacteria
TAC
Val
>WENV170590418
FUFK010719371
112279
Gammaproteobacteria
CAG
Leu
>WENV170590424
FUFK010719433
274150
Gammaproteobacteria
CAT
Met
>WENV170590565
FUFK010723342
271287
Gammaproteobacteria
CAT
Met
>WENV170590568
FUFK010723583
46525
Gammaproteobacteria
GCT
Ser
>WENV170590569
FUFK010723583
274723
Gammaproteobacteria
ACG
Arg
>WENV170590687
FUFK010730053
276287
Gammaproteobacteria
GAC
Val
>WENV170590693
FUFK010731123
452599
Gammaproteobacteria
TAC
Val
>WENV170590694
FUFK010731123
271613
Gammaproteobacteria
GTC
Asp
>WENV170590706
FUFK010732098
271388
Gammaproteobacteria
ACG
Arg
>WENV170590738
FUFK010734668
457453
Gammaproteobacteria
TTT
Lys
>WENV170590984
FUFK010746817
271611
Gammaproteobacteria
TGG
Pro
>WENV170590986
FUFK010746817
452598
Gammaproteobacteria
GTG
His
>WENV170591029
FUFK010748349
452604
Gammaproteobacteria
TTC
Glu
>WENV170591070
FUFK010749361
271464
Gammaproteobacteria
TGG
Pro
>WENV170591073
FUFK010749404
270700
Gammaproteobacteria
GAT
Ile
>WENV170591167
FUFK010753758
452599
Gammaproteobacteria
TAC
Val
>WENV170591168
FUFK010753758
271613
Gammaproteobacteria
GTC
Asp
>WENV170591213
FUFK010755682
276974
Gammaproteobacteria
GGG
Pro
>WENV170591236
FUFK010756691
454397
Gammaproteobacteria
TGT
Thr
>WENV170591239
FUFK010756691
467367
Gammaproteobacteria
GGT
Thr
>WENV170591268
FUFK010758430
655603
Gammaproteobacteria
GGT
Thr
>WENV170591464
FUFK010773818
452604
Gammaproteobacteria
TTC
Glu
>WENV170591505
FUFK010776881
271617
Gammaproteobacteria
GGG
Pro
>WENV170591518
FUFK010777686
457453
Gammaproteobacteria
TTT
Lys
>WENV170591587
FUFK010782197
271617
Gammaproteobacteria
GGG
Pro
>WENV170591596
FUFK010782975
270982
Gammaproteobacteria
GAT
Ile
>WENV170592052
FUFK010796649
274150
Gammaproteobacteria
CAT
Met
>WENV170592097
FUFK010798652
270982
Gammaproteobacteria
GAT
Ile
>WENV170592295
FUFK010803933
452604
Gammaproteobacteria
TTC
Glu
>WENV170592306
FUFK010804282
452605
Gammaproteobacteria
GGC
Ala
>WENV170592307
FUFK010804282
452604
Gammaproteobacteria
TTC
Glu
>WENV170592309
FUFK010804314
291681
Gammaproteobacteria
GAT
Ile
>WENV170592310
FUFK010804314
452602
Gammaproteobacteria
TGC
Ala
>WENV170592311
FUFK010804425
276185
Gammaproteobacteria
TGG
Pro
>WENV170592334
FUFK010805019
452604
Gammaproteobacteria
TTC
Glu
>WENV170592461
FUFK010807152
274150
Gammaproteobacteria
CAT
Met
>WENV170592463
FUFK010807163
456510
Gammaproteobacteria
GGC
Ala
>WENV170592560
FUFK010809802
451654
Gammaproteobacteria
GGT
Thr
>WENV170592565
FUFK010810214
451982
Gammaproteobacteria
GGC
Ala
>WENV170592566
FUFK010810214
459479
Gammaproteobacteria
TTC
Glu
>WENV170592568
FUFK010810295
457453
Gammaproteobacteria
TTT
Lys
>WENV170592569
FUFK010810295
30792
Gammaproteobacteria
GGA
Ser
>WENV170592576
FUFK010810777
270690
Gammaproteobacteria
CAT
Met
>WENV170592585
FUFK010811531
179942
Gammaproteobacteria
TAG
Leu
>WENV170592607
FUFK010812625
457171
Gammaproteobacteria
GTT
Asn
>WENV170592732
FUFK010817546
271464
Gammaproteobacteria
TGG
Pro
>WENV170592733
FUFK010817546
284350
Gammaproteobacteria
TCT
Arg
>WENV170592937
FUFK010828936
270691
Gammaproteobacteria
GGG
Pro
>WENV170593014
FUFK010835280
276974
Gammaproteobacteria
GGG
Pro
>WENV170593030
FUFK010837579
457453
Gammaproteobacteria
TTT
Lys
>WENV170593060
FUFK010840209
271617
Gammaproteobacteria
GGG
Pro
>WENV170593084
FUFK010841507
452601
Gammaproteobacteria
TTT
Lys
>WENV170593149
FUFK010848578
273122
Gammaproteobacteria
CAT
Met
>WENV170593150
FUFK010848578
273122
Gammaproteobacteria
CAT
Met
>WENV170593229
FUFK010853267
271616
Gammaproteobacteria
CAT
Met
>WENV170593241
FUFK010853573
276185
Gammaproteobacteria
TGG
Pro
>WENV170593258
FUFK010854153
452599
Gammaproteobacteria
TAC
Val
>WENV170593259
FUFK010854153
271613
Gammaproteobacteria
GTC
Asp
>WENV170593267
FUFK010854505
86883
Gammaproteobacteria
GGA
Ser
>WENV170593288
FUFK010856045
270700
Gammaproteobacteria
GAT
Ile
>WENV170593347
FUFK010864213
454964
Gammaproteobacteria
TTC
Glu
>WENV170593373
FUFK010869312
278942
Gammaproteobacteria
CCG
Arg
>WENV170593401
FUFK010874759
291681
Gammaproteobacteria
GAT
Ile
>WENV170593402
FUFK010874759
452602
Gammaproteobacteria
TGC
Ala
>WENV170593445
FUFK010884607
271253
Gammaproteobacteria
CAT
Met
>WENV170593598
FUFK010926940
291681
Gammaproteobacteria
GAT
Ile
>WENV170593599
FUFK010926940
452602
Gammaproteobacteria
TGC
Ala
>WENV170593626
FUFK010935828
274723
Gammaproteobacteria
ACG
Arg
>WENV170593817
FUFK011022114
273857
Gammaproteobacteria
TGG
Pro
>WENV170594042
FUFK011147702
278579
Gammaproteobacteria
GTC
Asp
>WENV170594126
FUFK011190157
276185
Gammaproteobacteria
TGG
Pro
>WENV170594139
FUFK011194391
271253
Gammaproteobacteria
CAT
Met
>WENV170594179
FUFK011211065
270982
Gammaproteobacteria
GAT
Ile
>WENV170594249
FUFK011250175
276974
Gammaproteobacteria
GGG
Pro
>WENV170594298
FUFK011265954
455405
Gammaproteobacteria
GGT
Thr
>WENV170594311
FUFK011270830
271464
Gammaproteobacteria
TGG
Pro
>WENV170594312
FUFK011270830
284350
Gammaproteobacteria
TCT
Arg
>WENV170594536
FUFK011351211
276975
Gammaproteobacteria
TGG
Pro
>WENV170594537
FUFK011351211
276976
Gammaproteobacteria
TCT
Arg
>WENV170594538
FUFK011351211
453181
Gammaproteobacteria
GTG
His
>WENV170594539
FUFK011351211
181084
Gammaproteobacteria
TAG
Leu
>WENV170594540
FUFK011351211
458352
Gammaproteobacteria
TTG
Gln
>WENV170594689
FUFK011420034
274166
Gammaproteobacteria
GAC
Val
>WENV170594693
FUFK011422918
270982
Gammaproteobacteria
GAT
Ile
>WENV170594752
FUFK011458254
291681
Gammaproteobacteria
GAT
Ile
>WENV170594846
FUFK011501603
655195
Gammaproteobacteria
GCC
Gly
>WENV170595032
FUFK011586427
270982
Gammaproteobacteria
GAT
Ile
>WENV170595054
FUFK011595272
270982
Gammaproteobacteria
GAT
Ile
>WENV170595078
FUFK011608523
271464
Gammaproteobacteria
TGG
Pro
>WENV170595086
FUFK011614492
270982
Gammaproteobacteria
GAT
Ile
>WENV170595124
FUFK011632163
273328
Gammaproteobacteria
GAC
Val
>WENV170595159
FUFK011654254
270693
Gammaproteobacteria
CCT
Arg
>WENV170595181
FUFK011662093
112813
Gammaproteobacteria
CAG
Leu
>WENV170595390
FUFK011763121
455405
Gammaproteobacteria
GGT
Thr
>WENV170595516
FUFK011831893
452597
Gammaproteobacteria
TTG
Gln
>WENV170595563
FUFK011851074
180112
Gammaproteobacteria
TAG
Leu
>WENV170595606
FUFK011873580
112278
Gammaproteobacteria
CAA
Leu
>WENV170595638
FUFK011894189
273845
Gammaproteobacteria
GGG
Pro
>WENV170595663
FUFK011911938
291681
Gammaproteobacteria
GAT
Ile
>WENV170595664
FUFK011911938
452602
Gammaproteobacteria
TGC
Ala
>WENV170595715
FUFK011932889
281115
Gammaproteobacteria
GAT
Ile
>WENV170595831
FUFK011989535
180112
Gammaproteobacteria
TAG
Leu
>WENV170595914
FUFK012022680
271464
Gammaproteobacteria
TGG
Pro
>WENV170595946
FUFK012031490
281115
Gammaproteobacteria
GAT
Ile
>WENV170595962
FUFK012039907
30520
Gammaproteobacteria
TGA
Ser
>WENV170596058
FUFK012087380
780241
Gammaproteobacteria
GCA
Cys
>WENV170596115
FUFK012115346
271464
Gammaproteobacteria
TGG
Pro
>WENV170596303
FUFK012168454
454397
Gammaproteobacteria
TGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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