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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170704778
LLEN01000008
282683
Gammaproteobacteria
GGC
Ala
>WENV170704782
LLEN01000016
176173
Gammaproteobacteria
>WENV170704784
LLEN01000020
119403
Gammaproteobacteria
GAG
Leu
>WENV170704787
LLEN01000024
280810
Gammaproteobacteria
GTG
His
>WENV170704789
LLEN01000024
280810
Gammaproteobacteria
GTG
His
>WENV170704791
LLEN01000030
72298
Gammaproteobacteria
GGA
Ser
>WENV170704792
LLEN01000033
500085
Gammaproteobacteria
GCA
Cys
>WENV170704793
LLEN01000033
500085
Gammaproteobacteria
GCA
Cys
>WENV170704799
LLEN01000109
289380
Gammaproteobacteria
GGT
Thr
>WENV170704800
LLEN01000110
238652
Gammaproteobacteria
CAT
Met
>WENV170704801
LLEN01000119
72298
Gammaproteobacteria
GGA
Ser
>WENV170704807
LLEN01000228
500085
Gammaproteobacteria
GCA
Cys
>WENV170704808
LLEN01000228
331709
Gammaproteobacteria
GCC
Gly
>WENV170704809
LLEN01000228
73055
Gammaproteobacteria
TAA
Leu
>WENV170704810
LLEN01000250
184288
Gammaproteobacteria
TCT
Arg
>WENV170704813
LLEN01000533
13231
Gammaproteobacteria
GCT
Ser
>WENV170704827
LLEN01001298
502867
Gammaproteobacteria
GCA
Cys
>WENV170704828
LLEN01001433
178004
Gammaproteobacteria
CCA
Trp
>WENV170704832
LLEN01002047
176173
Gammaproteobacteria
>WENV170704849
LLEN01003731
205770
Gammaproteobacteria
ACG
Arg
>WENV170704850
LLEN01003731
205770
Gammaproteobacteria
ACG
Arg
>WENV170704851
LLEN01003846
13469
Gammaproteobacteria
GCT
Ser
>WENV170704852
LLEN01003846
180719
Gammaproteobacteria
ACG
Arg
>WENV170704853
LLEN01004193
180718
Gammaproteobacteria
CAT
Met
>WENV170704857
LLEN01004610
32355
Gammaproteobacteria
GGA
Ser
>WENV170704864
LLEN01004953
481314
Gammaproteobacteria
GCA
Cys
>WENV170704865
LLEN01005327
197991
Gammaproteobacteria
ACG
Arg
>WENV170704866
LLEN01005327
242732
Gammaproteobacteria
ACG
Arg
>WENV170704867
LLEN01005327
197991
Gammaproteobacteria
ACG
Arg
>WENV170704873
LLEN01007071
334421
Gammaproteobacteria
TGT
Thr
>WENV170704874
LLEN01007653
335190
Gammaproteobacteria
TTT
Lys
>WENV170704875
LLEN01007671
178006
Gammaproteobacteria
GGG
Pro
>WENV170704888
LLEN01009538
197991
Gammaproteobacteria
ACG
Arg
>WENV170704889
LLEN01009538
242732
Gammaproteobacteria
ACG
Arg
>WENV170704890
LLEN01009538
13231
Gammaproteobacteria
GCT
Ser
>WENV170704894
LLEN01010423
210138
Gammaproteobacteria
TCT
Arg
>WENV170704896
LLEN01010617
134404
Gammaproteobacteria
TAG
Leu
>WENV170704897
LLEN01010617
469713
Gammaproteobacteria
TTG
Gln
>WENV170704904
LLEN01012124
134404
Gammaproteobacteria
TAG
Leu
>WENV170704905
LLEN01012124
469713
Gammaproteobacteria
TTG
Gln
>WENV170704906
LLEN01012464
285826
Gammaproteobacteria
GGT
Thr
>WENV170704908
LLEN01013613
282687
Gammaproteobacteria
GCC
Gly
>WENV170704909
LLEN01013613
481036
Gammaproteobacteria
GCA
Cys
>WENV170704913
LLEN01013940
238652
Gammaproteobacteria
CAT
Met
>WENV170704922
LLEN01015598
178439
Gammaproteobacteria
GAT
Ile
>WENV170704925
LLEN01015804
303413
Gammaproteobacteria
GGT
Thr
>WENV170704929
LLEN01017283
469713
Gammaproteobacteria
TTG
Gln
>WENV170704932
LLEN01018399
73502
Gammaproteobacteria
CAG
Leu
>WENV170704941
LLEN01019822
316553
Gammaproteobacteria
>WENV170704942
LLEN01019822
285837
Gammaproteobacteria
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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