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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170015484
AZIH01000062
275549
Gammaproteobacteria
CAT
Met
>WENV170015495
AZIH01000734
279294
Gammaproteobacteria
GGG
Pro
>WENV170015502
AZIH01001422
779604
Gammaproteobacteria
GCA
Cys
>WENV170015501
AZIH01001422
452412
Gammaproteobacteria
GCC
Gly
>WENV170015506
AZIH01001793
271464
Gammaproteobacteria
TGG
Pro
>WENV170015507
AZIH01001793
302461
Gammaproteobacteria
TCT
Arg
>WENV170015514
AZIH01002312
779604
Gammaproteobacteria
GCA
Cys
>WENV170015513
AZIH01002312
452412
Gammaproteobacteria
GCC
Gly
>WENV170015526
AZIH01002957
271458
Gammaproteobacteria
GGG
Pro
>WENV170015535
AZIH01003474
452410
Gammaproteobacteria
TAC
Val
>WENV170015537
AZIH01003474
452410
Gammaproteobacteria
TAC
Val
>WENV170015541
AZIH01003609
452414
Gammaproteobacteria
TTC
Glu
>WENV170015550
AZIH01004369
452414
Gammaproteobacteria
TTC
Glu
>WENV170015553
AZIH01004615
271455
Gammaproteobacteria
GAC
Val
>WENV170015555
AZIH01004617
452416
Gammaproteobacteria
TTT
Lys
>WENV170015554
AZIH01004617
452416
Gammaproteobacteria
TTT
Lys
>WENV170015557
AZIH01004921
464808
Gammaproteobacteria
TTT
Lys
>WENV170015561
AZIH01005104
657393
Gammaproteobacteria
TCC
Gly
>WENV170015573
AZIH01005442
452412
Gammaproteobacteria
GCC
Gly
>WENV170015572
AZIH01005442
452414
Gammaproteobacteria
TTC
Glu
>WENV170015574
AZIH01005443
112371
Gammaproteobacteria
CAA
Leu
>WENV170015592
AZIH01008594
451784
Gammaproteobacteria
GAA
Phe
>WENV170015595
AZIH01008938
451784
Gammaproteobacteria
GAA
Phe
>WENV170015596
AZIH01008978
273328
Gammaproteobacteria
GAC
Val
>WENV170015600
AZIH01009696
457453
Gammaproteobacteria
TTT
Lys
>WENV170015605
AZIH01010668
464809
Gammaproteobacteria
GAA
Phe
>WENV170015608
AZIH01011094
276185
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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