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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170120842
CENL01009132
46072
Alphaproteobacteria
GCT
Ser
>WENV170120845
CENL01009327
654791
Alphaproteobacteria
CTC
Glu
>WENV170120859
CENL01011205
270796
Alphaproteobacteria
GTC
Asp
>WENV170120882
CENL01014575
454504
Alphaproteobacteria
CAT
Met
>WENV170120927
CENL01024447
653534
Alphaproteobacteria
GCC
Gly
>WENV170120928
CENL01024447
656001
Alphaproteobacteria
GCC
Gly
>WENV170120930
CENL01024621
275828
Alphaproteobacteria
GTC
Asp
>WENV170120944
CENL01026058
780486
Alphaproteobacteria
TCC
Gly
>WENV170120961
CENL01029054
46072
Alphaproteobacteria
GCT
Ser
>WENV170120999
CENL01035906
274224
Alphaproteobacteria
CAT
Met
>WENV170121029
CENL01039436
274131
Alphaproteobacteria
CAT
Met
>WENV170121030
CENL01039436
653532
Alphaproteobacteria
GTT
Asn
>WENV170121034
CENL01039769
454512
Alphaproteobacteria
CCA
Trp
>WENV170121040
CENL01040323
275155
Alphaproteobacteria
GGG
Pro
>WENV170121048
CENL01041134
218119
Alphaproteobacteria
>WENV170121049
CENL01041307
654791
Alphaproteobacteria
CTC
Glu
>WENV170121078
CENL01046152
291540
Alphaproteobacteria
TGG
Pro
>WENV170121094
CENL01049333
46237
Alphaproteobacteria
TGA
Ser
>WENV170121105
CENL01050543
278722
Alphaproteobacteria
ACG
Arg
>WENV170121157
CENL01054280
274130
Alphaproteobacteria
CGG
Pro
>WENV170121164
CENL01054539
661003
Alphaproteobacteria
GAA
Phe
>WENV170121165
CENL01054539
655171
Alphaproteobacteria
GGT
Thr
>WENV170121166
CENL01054551
780327
Alphaproteobacteria
GCA
Cys
>WENV170121171
CENL01054589
655358
Alphaproteobacteria
TTG
Gln
>WENV170121173
CENL01054623
452917
Alphaproteobacteria
TAC
Val
>WENV170121176
CENL01054639
655166
Alphaproteobacteria
CAC
Val
>WENV170121243
CENL01080422
780283
Alphaproteobacteria
TCC
Gly
>WENV170121313
CENL01105042
455115
Alphaproteobacteria
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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