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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170192810
CEPG01014097
294369
Alphaproteobacteria
CGG
Pro
>WENV170192860
CEPG01022452
282974
Alphaproteobacteria
GTG
His
>WENV170192803
CEPG01012724
454434
Alphaproteobacteria
GGC
Ala
>WENV170192931
CEPG01033584
654913
Alphaproteobacteria
GTT
Asn
>WENV170192725
CEPG01000788
281026
Alphaproteobacteria
CAT
Met
>WENV170192811
CEPG01014097
782892
Alphaproteobacteria
TTG
Gln
>WENV170192887
CEPG01026934
655363
Alphaproteobacteria
GGT
Thr
>WENV170192873
CEPG01024018
273451
Alphaproteobacteria
GTG
His
>WENV170192930
CEPG01033442
455506
Alphaproteobacteria
CAT
Met
>WENV170192975
CEPG01040868
19958
Alphaproteobacteria
GCT
Ser
>WENV170192967
CEPG01039987
274138
Alphaproteobacteria
CAT
Met
>WENV170192893
CEPG01027846
455821
Alphaproteobacteria
CTT
Lys
>WENV170192768
CEPG01008400
45928
Alphaproteobacteria
TGA
Ser
>WENV170192954
CEPG01038831
454512
Alphaproteobacteria
CCA
Trp
>WENV170192754
CEPG01005710
455360
Alphaproteobacteria
CGC
Ala
>WENV170192823
CEPG01017149
455360
Alphaproteobacteria
CGC
Ala
>WENV170192785
CEPG01009928
655361
Alphaproteobacteria
GCC
Gly
>WENV170192875
CEPG01024260
780346
Alphaproteobacteria
CTG
Gln
>WENV170193030
CEPG01061788
20317
Alphaproteobacteria
GCT
Ser
>WENV170192792
CEPG01010797
281027
Alphaproteobacteria
CCT
Arg
>WENV170192753
CEPG01005445
31090
Alphaproteobacteria
GGA
Ser
>WENV170192752
CEPG01005111
454433
Alphaproteobacteria
TGT
Thr
>WENV170192905
CEPG01029320
454433
Alphaproteobacteria
TGT
Thr
>WENV170192923
CEPG01032962
454433
Alphaproteobacteria
TGT
Thr
>WENV170192986
CEPG01042523
658005
Alphaproteobacteria
GCC
Gly
>WENV170192962
CEPG01039644
654915
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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