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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170443718
CEUX01006080
275457
Gammaproteobacteria
ACG
Arg
>WENV170444297
CEUX01086130
779495
Gammaproteobacteria
CCC
Gly
>WENV170444729
CEUX01211474
282342
Gammaproteobacteria
CAT
Met
>WENV170444443
CEUX01102719
653594
Gammaproteobacteria
CCT
Arg
>WENV170444366
CEUX01097514
456271
Gammaproteobacteria
GCC
Gly
>WENV170443821
CEUX01019021
281965
Gammaproteobacteria
TCT
Arg
>WENV170443854
CEUX01024068
272023
Gammaproteobacteria
GAT
Ile
>WENV170443729
CEUX01007055
276974
Gammaproteobacteria
GGG
Pro
>WENV170444186
CEUX01068494
458351
Gammaproteobacteria
TTG
Gln
>WENV170443711
CEUX01004935
296278
Gammaproteobacteria
GAT
Ile
>WENV170444688
CEUX01203286
457171
Gammaproteobacteria
GTT
Asn
>WENV170443703
CEUX01003070
275002
Gammaproteobacteria
ACG
Arg
>WENV170443704
CEUX01003070
275002
Gammaproteobacteria
ACG
Arg
>WENV170443820
CEUX01019021
273756
Gammaproteobacteria
TGG
Pro
>WENV170444124
CEUX01057699
180499
Gammaproteobacteria
GTA
Tyr
>WENV170444411
CEUX01101572
276973
Gammaproteobacteria
GAC
Val
>WENV170444194
CEUX01069207
452332
Gammaproteobacteria
GTG
His
>WENV170444142
CEUX01060766
452412
Gammaproteobacteria
GCC
Gly
>WENV170443734
CEUX01007752
452412
Gammaproteobacteria
GCC
Gly
>WENV170444016
CEUX01043803
451876
Gammaproteobacteria
GTG
His
>WENV170443824
CEUX01019632
296296
Gammaproteobacteria
ACG
Arg
>WENV170443825
CEUX01019632
296296
Gammaproteobacteria
ACG
Arg
>WENV170444121
CEUX01057400
113737
Gammaproteobacteria
CAA
Leu
>WENV170443731
CEUX01007304
179999
Gammaproteobacteria
CAA
Leu
>WENV170444163
CEUX01065234
781121
Gammaproteobacteria
GCA
Cys
>WENV170443947
CEUX01034245
45712
Gammaproteobacteria
GGA
Ser
>WENV170444627
CEUX01181925
86900
Gammaproteobacteria
TGA
Ser
>WENV170443699
CEUX01002249
276972
Gammaproteobacteria
CCA
Trp
>WENV170443954
CEUX01034914
180500
Gammaproteobacteria
TAG
Leu
>WENV170443758
CEUX01009780
451870
Gammaproteobacteria
CCA
Trp
>WENV170444685
CEUX01203035
271316
Gammaproteobacteria
CAT
Met
>WENV170444362
CEUX01096813
270904
Gammaproteobacteria
CGG
Pro
>WENV170443701
CEUX01002477
117395
Gammaproteobacteria
CAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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