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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170550780
CXWF01025100
275843
Alphaproteobacteria
CCT
Arg
>WENV170550868
CXWF01041174
655365
Alphaproteobacteria
TTC
Glu
>WENV170551029
CXWF01074045
273797
Alphaproteobacteria
GGG
Pro
>WENV170550935
CXWF01051859
655167
Alphaproteobacteria
TTC
Glu
>WENV170551055
CXWF01090634
455289
Alphaproteobacteria
TTT
Lys
>WENV170550820
CXWF01033136
46237
Alphaproteobacteria
TGA
Ser
>WENV170550986
CXWF01062526
30553
Alphaproteobacteria
GGA
Ser
>WENV170551050
CXWF01085974
780331
Alphaproteobacteria
TCC
Gly
>WENV170550648
CXWF01008287
273799
Alphaproteobacteria
CCG
Arg
>WENV170550864
CXWF01040963
46035
Alphaproteobacteria
GGA
Ser
>WENV170550901
CXWF01046648
454623
Alphaproteobacteria
TAC
Val
>WENV170550770
CXWF01024381
299109
Alphaproteobacteria
GAC
Val
>WENV170551049
CXWF01085825
154065
Alphaproteobacteria
GAG
Leu
>WENV170550776
CXWF01025094
456891
Alphaproteobacteria
CGT
Thr
>WENV170550858
CXWF01039543
451742
Alphaproteobacteria
GGC
Ala
>WENV170550962
CXWF01056932
653532
Alphaproteobacteria
GTT
Asn
>WENV170550552
CXWF01000572
653532
Alphaproteobacteria
GTT
Asn
>WENV170550871
CXWF01041886
19999
Alphaproteobacteria
GCT
Ser
>WENV170550793
CXWF01028002
655363
Alphaproteobacteria
GGT
Thr
>WENV170550700
CXWF01015148
274144
Alphaproteobacteria
GTG
His
>WENV170551011
CXWF01067118
455172
Alphaproteobacteria
GGC
Ala
>WENV170550551
CXWF01000572
274131
Alphaproteobacteria
CAT
Met
>WENV170550787
CXWF01026816
655566
Alphaproteobacteria
GAC
Val
>WENV170550994
CXWF01062926
219697
Alphaproteobacteria
>WENV170550688
CXWF01013845
274138
Alphaproteobacteria
CAT
Met
>WENV170550950
CXWF01054945
113188
Alphaproteobacteria
GAG
Leu
>WENV170550835
CXWF01035804
287552
Alphaproteobacteria
GAT
Ile
>WENV170550660
CXWF01010228
46072
Alphaproteobacteria
GCT
Ser
>WENV170550661
CXWF01010230
456892
Alphaproteobacteria
CGC
Ala
>WENV170550639
CXWF01006582
275730
Alphaproteobacteria
TGG
Pro
>WENV170550919
CXWF01049364
454512
Alphaproteobacteria
CCA
Trp
>WENV170550956
CXWF01055947
655361
Alphaproteobacteria
GCC
Gly
>WENV170550651
CXWF01008885
154064
Alphaproteobacteria
CAG
Leu
>WENV170550674
CXWF01011871
274141
Alphaproteobacteria
CCT
Arg
>WENV170550845
CXWF01036839
671670
Alphaproteobacteria
CAC
Val
>WENV170550572
CXWF01001316
112802
Alphaproteobacteria
GAG
Leu
>WENV170550931
CXWF01051748
273160
Alphaproteobacteria
ACG
Arg
>WENV170550778
CXWF01025098
454914
Alphaproteobacteria
TTT
Lys
>WENV170550735
CXWF01019634
112839
Alphaproteobacteria
CAG
Leu
>WENV170550985
CXWF01062468
654103
Alphaproteobacteria
GAA
Phe
>WENV170550684
CXWF01013297
180561
Alphaproteobacteria
TAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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