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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029840
FTJL01008112
273790
Betaproteobacteria
CAT
Met
>WENV180029732
FTJL01002358
283460
Betaproteobacteria
TCT
Arg
>WENV180029691
FTJL01000643
273217
Betaproteobacteria
ACG
Arg
>WENV180029765
FTJL01004185
273217
Betaproteobacteria
ACG
Arg
>WENV180029927
FTJL01022999
273217
Betaproteobacteria
ACG
Arg
>WENV180029672
FTJL01000098
455327
Betaproteobacteria
GCC
Gly
>WENV180029952
FTJL01032874
455327
Betaproteobacteria
GCC
Gly
>WENV180030242
FTJL01430964
455327
Betaproteobacteria
GCC
Gly
>WENV180029679
FTJL01000342
454902
Betaproteobacteria
CGC
Ala
>WENV180030198
FTJL01323409
454293
Betaproteobacteria
CGT
Thr
>WENV180029731
FTJL01002358
273261
Betaproteobacteria
TGG
Pro
>WENV180029865
FTJL01010138
47219
Betaproteobacteria
CGA
Ser
>WENV180029787
FTJL01005067
273791
Betaproteobacteria
TTG
Gln
>WENV180029704
FTJL01001150
780081
Betaproteobacteria
CCC
Gly
>WENV180030158
FTJL01237371
271596
Betaproteobacteria
GAT
Ile
>WENV180029870
FTJL01010855
276012
Betaproteobacteria
TTG
Gln
>WENV180029998
FTJL01054593
45953
Betaproteobacteria
CGA
Ser
>WENV180029681
FTJL01000393
180358
Betaproteobacteria
CAG
Leu
>WENV180030159
FTJL01237371
452924
Betaproteobacteria
TGC
Ala
>WENV180029950
FTJL01031001
654880
Betaproteobacteria
GGT
Thr
>WENV180029871
FTJL01010916
780080
Betaproteobacteria
GCA
Cys
>WENV180030074
FTJL01125903
452202
Betaproteobacteria
TAC
Val
>WENV180029906
FTJL01017636
32667
Betaproteobacteria
GGA
Ser
>WENV180029942
FTJL01029164
112709
Betaproteobacteria
TAG
Leu
>WENV180029863
FTJL01009886
454348
Betaproteobacteria
GAA
Phe
>WENV180030134
FTJL01204371
454316
Betaproteobacteria
TGT
Thr
>WENV180029745
FTJL01003090
8303
Betaproteobacteria
GCT
Ser
>WENV180029953
FTJL01032874
780070
Betaproteobacteria
GCA
Cys
>WENV180029675
FTJL01000201
457269
Betaproteobacteria
CTT
Lys
>WENV180029703
FTJL01001078
8271
Betaproteobacteria
GCT
Ser
>WENV180030030
FTJL01075355
113251
Betaproteobacteria
CAA
Leu
>WENV180029671
FTJL01000098
464315
Betaproteobacteria
GTT
Asn
>WENV180029958
FTJL01034493
456523
Betaproteobacteria
TTC
Glu
>WENV180029896
FTJL01015597
30661
Betaproteobacteria
GGA
Ser
>WENV180030100
FTJL01157499
30491
Betaproteobacteria
GGA
Ser
>WENV180029872
FTJL01011061
455528
Betaproteobacteria
CCG
Arg
>WENV180029666
FTJL01000021
653938
Betaproteobacteria
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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