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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170651655
JRYG01000262
780573
Betaproteobacteria
TCC
Gly
>WENV170651739
JRYG01001242
457606
Betaproteobacteria
TTT
Lys
>WENV170651758
JRYG01001788
454902
Betaproteobacteria
CGC
Ala
>WENV170651795
JRYG01003251
289669
Betaproteobacteria
GAT
Ile
>WENV170651806
JRYG01003730
454902
Betaproteobacteria
CGC
Ala
>WENV170651818
JRYG01004308
463660
Betaproteobacteria
CCA
Trp
>WENV170651852
JRYG01006671
477700
Betaproteobacteria
GCC
Gly
>WENV170651854
JRYG01006671
477700
Betaproteobacteria
GCC
Gly
>WENV170651897
JRYG01011762
780144
Betaproteobacteria
GCA
Cys
>WENV170651925
JRYG01015244
780210
Betaproteobacteria
TCC
Gly
>WENV170651926
JRYG01015244
667622
Betaproteobacteria
GGT
Thr
>WENV170652048
JRYG01058374
487364
Betaproteobacteria
TTC
Glu
>WENV170652166
JRYG01159086
454227
Betaproteobacteria
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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