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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
139 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170663774
JYMV01009222
779604
Gammaproteobacteria
GCA
Cys
>WENV170666942
JYMV01042270
779604
Gammaproteobacteria
GCA
Cys
>WENV170664950
JYMV01021253
271464
Gammaproteobacteria
TGG
Pro
>WENV170665268
JYMV01024087
271464
Gammaproteobacteria
TGG
Pro
>WENV170664952
JYMV01021253
452415
Gammaproteobacteria
GTG
His
>WENV170665270
JYMV01024087
452415
Gammaproteobacteria
GTG
His
>WENV170663895
JYMV01010471
452406
Gammaproteobacteria
TGC
Ala
>WENV170664069
JYMV01012532
452406
Gammaproteobacteria
TGC
Ala
>WENV170663299
JYMV01003958
656944
Gammaproteobacteria
CCT
Arg
>WENV170666712
JYMV01040054
656944
Gammaproteobacteria
CCT
Arg
>WENV170664356
JYMV01015662
453181
Gammaproteobacteria
GTG
His
>WENV170664359
JYMV01015662
453181
Gammaproteobacteria
GTG
His
>WENV170667418
JYMV01047263
453181
Gammaproteobacteria
GTG
His
>WENV170667421
JYMV01047263
453181
Gammaproteobacteria
GTG
His
>WENV170667718
JYMV01050743
273856
Gammaproteobacteria
GAC
Val
>WENV170664812
JYMV01020133
270982
Gammaproteobacteria
GAT
Ile
>WENV170666139
JYMV01033768
653834
Gammaproteobacteria
TCC
Gly
>WENV170666143
JYMV01033769
653834
Gammaproteobacteria
TCC
Gly
>WENV170666940
JYMV01042270
30353
Gammaproteobacteria
GGA
Ser
>WENV170663772
JYMV01009222
30353
Gammaproteobacteria
GGA
Ser
>WENV170667855
JYMV01052232
276974
Gammaproteobacteria
GGG
Pro
>WENV170665761
JYMV01030018
276974
Gammaproteobacteria
GGG
Pro
>WENV170664992
JYMV01021566
276974
Gammaproteobacteria
GGG
Pro
>WENV170667884
JYMV01052744
458351
Gammaproteobacteria
TTG
Gln
>WENV170664398
JYMV01015962
458351
Gammaproteobacteria
TTG
Gln
>WENV170667641
JYMV01049885
452413
Gammaproteobacteria
GGC
Ala
>WENV170667638
JYMV01049884
452413
Gammaproteobacteria
GGC
Ala
>WENV170665266
JYMV01024087
452413
Gammaproteobacteria
GGC
Ala
>WENV170665165
JYMV01023257
452413
Gammaproteobacteria
GGC
Ala
>WENV170664684
JYMV01019043
452413
Gammaproteobacteria
GGC
Ala
>WENV170664948
JYMV01021253
452413
Gammaproteobacteria
GGC
Ala
>WENV170666715
JYMV01040054
276971
Gammaproteobacteria
ACG
Arg
>WENV170666714
JYMV01040054
276971
Gammaproteobacteria
ACG
Arg
>WENV170667417
JYMV01047263
276976
Gammaproteobacteria
TCT
Arg
>WENV170664355
JYMV01015662
276976
Gammaproteobacteria
TCT
Arg
>WENV170664562
JYMV01017769
271458
Gammaproteobacteria
GGG
Pro
>WENV170664564
JYMV01017770
271458
Gammaproteobacteria
GGG
Pro
>WENV170664954
JYMV01021253
452416
Gammaproteobacteria
TTT
Lys
>WENV170664955
JYMV01021253
452416
Gammaproteobacteria
TTT
Lys
>WENV170667673
JYMV01050242
452416
Gammaproteobacteria
TTT
Lys
>WENV170667674
JYMV01050242
452416
Gammaproteobacteria
TTT
Lys
>WENV170667432
JYMV01047396
273857
Gammaproteobacteria
TGG
Pro
>WENV170664405
JYMV01015962
276973
Gammaproteobacteria
GAC
Val
>WENV170663437
JYMV01005610
276973
Gammaproteobacteria
GAC
Val
>WENV170663239
JYMV01003336
276973
Gammaproteobacteria
GAC
Val
>WENV170664498
JYMV01016953
780642
Gammaproteobacteria
GCA
Cys
>WENV170663680
JYMV01008479
271287
Gammaproteobacteria
CAT
Met
>WENV170663375
JYMV01004942
271287
Gammaproteobacteria
CAT
Met
>WENV170666941
JYMV01042270
452412
Gammaproteobacteria
GCC
Gly
>WENV170664820
JYMV01020194
452412
Gammaproteobacteria
GCC
Gly
>WENV170663773
JYMV01009222
452412
Gammaproteobacteria
GCC
Gly
>WENV170663771
JYMV01009222
452412
Gammaproteobacteria
GCC
Gly
>WENV170667892
JYMV01052744
458352
Gammaproteobacteria
TTG
Gln
>WENV170664401
JYMV01015962
458352
Gammaproteobacteria
TTG
Gln
>WENV170664404
JYMV01015962
458352
Gammaproteobacteria
TTG
Gln
>WENV170667887
JYMV01052744
458352
Gammaproteobacteria
TTG
Gln
>WENV170667889
JYMV01052744
458352
Gammaproteobacteria
TTG
Gln
>WENV170665839
JYMV01030757
271460
Gammaproteobacteria
CGG
Pro
>WENV170667675
JYMV01050274
271460
Gammaproteobacteria
CGG
Pro
>WENV170666137
JYMV01033768
452404
Gammaproteobacteria
TGT
Thr
>WENV170666141
JYMV01033769
452404
Gammaproteobacteria
TGT
Thr
>WENV170665952
JYMV01031820
113737
Gammaproteobacteria
CAA
Leu
>WENV170664084
JYMV01012689
113737
Gammaproteobacteria
CAA
Leu
>WENV170667433
JYMV01047396
273858
Gammaproteobacteria
TCT
Arg
>WENV170666739
JYMV01040319
271459
Gammaproteobacteria
CCT
Arg
>WENV170664377
JYMV01015775
271459
Gammaproteobacteria
CCT
Arg
>WENV170665983
JYMV01032107
781121
Gammaproteobacteria
GCA
Cys
>WENV170665862
JYMV01030975
781121
Gammaproteobacteria
GCA
Cys
>WENV170664945
JYMV01021253
452409
Gammaproteobacteria
TAC
Val
>WENV170664441
JYMV01016285
452409
Gammaproteobacteria
TAC
Val
>WENV170663447
JYMV01005704
273327
Gammaproteobacteria
ACG
Arg
>WENV170666725
JYMV01040121
273327
Gammaproteobacteria
ACG
Arg
>WENV170666870
JYMV01041623
273327
Gammaproteobacteria
ACG
Arg
>WENV170664817
JYMV01020194
271456
Gammaproteobacteria
ACG
Arg
>WENV170664818
JYMV01020194
271456
Gammaproteobacteria
ACG
Arg
>WENV170665345
JYMV01025072
271456
Gammaproteobacteria
ACG
Arg
>WENV170665346
JYMV01025072
271456
Gammaproteobacteria
ACG
Arg
>WENV170664626
JYMV01018370
273754
Gammaproteobacteria
GTT
Asn
>WENV170664627
JYMV01018370
273754
Gammaproteobacteria
GTT
Asn
>WENV170666434
JYMV01036919
273754
Gammaproteobacteria
GTT
Asn
>WENV170666435
JYMV01036919
273754
Gammaproteobacteria
GTT
Asn
>WENV170667284
JYMV01045595
273754
Gammaproteobacteria
GTT
Asn
>WENV170667285
JYMV01045595
273754
Gammaproteobacteria
GTT
Asn
>WENV170666220
JYMV01034655
113485
Gammaproteobacteria
CAA
Leu
>WENV170663956
JYMV01011098
113485
Gammaproteobacteria
CAA
Leu
>WENV170664813
JYMV01020133
467082
Gammaproteobacteria
TGC
Ala
>WENV170665911
JYMV01031463
458525
Gammaproteobacteria
TAC
Val
>WENV170664005
JYMV01011919
271613
Gammaproteobacteria
GTC
Asp
>WENV170664819
JYMV01020194
112371
Gammaproteobacteria
CAA
Leu
>WENV170663770
JYMV01009222
112371
Gammaproteobacteria
CAA
Leu
>WENV170664443
JYMV01016285
452410
Gammaproteobacteria
TAC
Val
>WENV170664947
JYMV01021253
452410
Gammaproteobacteria
TAC
Val
>WENV170667313
JYMV01045805
276972
Gammaproteobacteria
CCA
Trp
>WENV170666716
JYMV01040054
276972
Gammaproteobacteria
CCA
Trp
>WENV170665854
JYMV01030868
276972
Gammaproteobacteria
CCA
Trp
>WENV170663057
JYMV01001278
276972
Gammaproteobacteria
CCA
Trp
>WENV170667890
JYMV01052744
271286
Gammaproteobacteria
CAT
Met
>WENV170667885
JYMV01052744
271286
Gammaproteobacteria
CAT
Met
>WENV170664402
JYMV01015962
271286
Gammaproteobacteria
CAT
Met
>WENV170664399
JYMV01015962
271286
Gammaproteobacteria
CAT
Met
>WENV170667891
JYMV01052744
181084
Gammaproteobacteria
TAG
Leu
>WENV170667888
JYMV01052744
181084
Gammaproteobacteria
TAG
Leu
>WENV170664357
JYMV01015662
181084
Gammaproteobacteria
TAG
Leu
>WENV170664360
JYMV01015662
181084
Gammaproteobacteria
TAG
Leu
>WENV170664400
JYMV01015962
181084
Gammaproteobacteria
TAG
Leu
>WENV170664403
JYMV01015962
181084
Gammaproteobacteria
TAG
Leu
>WENV170667419
JYMV01047263
181084
Gammaproteobacteria
TAG
Leu
>WENV170667422
JYMV01047263
181084
Gammaproteobacteria
TAG
Leu
>WENV170667886
JYMV01052744
181084
Gammaproteobacteria
TAG
Leu
>WENV170666144
JYMV01033769
452405
Gammaproteobacteria
GGT
Thr
>WENV170666140
JYMV01033768
452405
Gammaproteobacteria
GGT
Thr
>WENV170663769
JYMV01009214
456234
Gammaproteobacteria
GAA
Phe
>WENV170663777
JYMV01009222
452414
Gammaproteobacteria
TTC
Glu
>WENV170664821
JYMV01020194
452414
Gammaproteobacteria
TTC
Glu
>WENV170664949
JYMV01021253
452414
Gammaproteobacteria
TTC
Glu
>WENV170665267
JYMV01024087
452414
Gammaproteobacteria
TTC
Glu
>WENV170666126
JYMV01033657
466510
Gammaproteobacteria
GCC
Gly
>WENV170665030
JYMV01021996
466510
Gammaproteobacteria
GCC
Gly
>WENV170663970
JYMV01011233
466510
Gammaproteobacteria
GCC
Gly
>WENV170663565
JYMV01006949
466510
Gammaproteobacteria
GCC
Gly
>WENV170665407
JYMV01025835
276970
Gammaproteobacteria
CCG
Arg
>WENV170667423
JYMV01047263
276975
Gammaproteobacteria
TGG
Pro
>WENV170667420
JYMV01047263
276975
Gammaproteobacteria
TGG
Pro
>WENV170667416
JYMV01047263
276975
Gammaproteobacteria
TGG
Pro
>WENV170664361
JYMV01015662
276975
Gammaproteobacteria
TGG
Pro
>WENV170664358
JYMV01015662
276975
Gammaproteobacteria
TGG
Pro
>WENV170664354
JYMV01015662
276975
Gammaproteobacteria
TGG
Pro
>WENV170666142
JYMV01033769
218035
Gammaproteobacteria
GTA
Tyr
>WENV170666138
JYMV01033768
218035
Gammaproteobacteria
GTA
Tyr
>WENV170667672
JYMV01050242
271455
Gammaproteobacteria
GAC
Val
>WENV170664944
JYMV01021253
271455
Gammaproteobacteria
GAC
Val
>WENV170667678
JYMV01050280
466186
Gammaproteobacteria
TGC
Ala
>WENV170667046
JYMV01043260
466186
Gammaproteobacteria
TGC
Ala
>WENV170665484
JYMV01026689
466186
Gammaproteobacteria
TGC
Ala
>WENV170666429
JYMV01036919
30792
Gammaproteobacteria
GGA
Ser
>WENV170665435
JYMV01026247
30792
Gammaproteobacteria
GGA
Ser
>WENV170663250
JYMV01003398
452407
Gammaproteobacteria
GAA
Phe
>WENV170665665
JYMV01029113
452407
Gammaproteobacteria
GAA
Phe
>WENV170666713
JYMV01040054
20134
Gammaproteobacteria
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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