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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180111171
OAPN01036101
780865
Betaproteobacteria
TCC
Gly
>WENV180111284
OAPN01052898
274063
Betaproteobacteria
ACG
Arg
>WENV180111405
OAPN01073938
452923
Betaproteobacteria
TTT
Lys
>WENV180111673
OAPN01136135
275112
Betaproteobacteria
CAT
Met
>WENV180110632
OAPN01001750
274221
Betaproteobacteria
TGG
Pro
>WENV180111473
OAPN01089277
276295
Betaproteobacteria
TCT
Arg
>WENV180110948
OAPN01015458
457606
Betaproteobacteria
TTT
Lys
>WENV180110671
OAPN01003123
780079
Betaproteobacteria
TCC
Gly
>WENV180111153
OAPN01034386
276296
Betaproteobacteria
CAT
Met
>WENV180111026
OAPN01022654
454455
Betaproteobacteria
CCG
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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