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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>SRA1002278
SRR001308.343988
454453
Betaproteobacteria
GCC
Gly
>SRA1002193
SRR001308.297338
454453
Betaproteobacteria
GCC
Gly
>SRA1001881
SRR001308.107842
454453
Betaproteobacteria
GCC
Gly
>SRA1002311
SRR001308.369796
780579
Betaproteobacteria
GCA
Cys
>SRA1001960
SRR001308.149161
780579
Betaproteobacteria
GCA
Cys
>SRA1001766
SRR001308.41882
780579
Betaproteobacteria
GCA
Cys
>SRA1002285
SRR001308.347611
154091
Betaproteobacteria
GTA
Tyr
>SRA1001813
SRR001308.68098
30491
Betaproteobacteria
GGA
Ser
>SRA1002179
SRR001308.290020
283584
Betaproteobacteria
CAT
Met
>SRA1001844
SRR001308.87005
463660
Betaproteobacteria
CCA
Trp
>SRA1001946
SRR001308.143819
452713
Betaproteobacteria
GAA
Phe
>SRA1002090
SRR001308.235477
180620
Betaproteobacteria
GAG
Leu
>SRA1001966
SRR001308.151941
180620
Betaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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