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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
78 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170175820
CEOS01010280
237493
Alphaproteobacteria
CCA
Trp
>WENV170175951
CEOS01022017
237493
Alphaproteobacteria
CCA
Trp
>WENV170176054
CEOS01033585
237493
Alphaproteobacteria
CCA
Trp
>WENV170176524
CEOS01087985
237493
Alphaproteobacteria
CCA
Trp
>WENV170176287
CEOS01057481
339737
Alphaproteobacteria
GAC
Val
>WENV170176170
CEOS01047878
419488
Alphaproteobacteria
TCC
Gly
>WENV170177167
CEOS01211122
412798
Alphaproteobacteria
CTG
Gln
>WENV170175724
CEOS01001490
268154
Alphaproteobacteria
TGT
Thr
>WENV170176136
CEOS01044231
268154
Alphaproteobacteria
TGT
Thr
>WENV170176215
CEOS01051823
254294
Alphaproteobacteria
>WENV170176225
CEOS01052681
254294
Alphaproteobacteria
>WENV170176630
CEOS01101887
254294
Alphaproteobacteria
>WENV170176852
CEOS01131281
254294
Alphaproteobacteria
>WENV170176207
CEOS01050833
59361
Alphaproteobacteria
GAG
Leu
>WENV170176633
CEOS01102316
58865
Alphaproteobacteria
GAG
Leu
>WENV170176978
CEOS01143546
27392
Alphaproteobacteria
GGA
Ser
>WENV170176641
CEOS01103909
162089
Alphaproteobacteria
TGG
Pro
>WENV170175783
CEOS01007547
241021
Alphaproteobacteria
GGC
Ala
>WENV170176266
CEOS01056212
241021
Alphaproteobacteria
GGC
Ala
>WENV170175981
CEOS01025484
146683
Alphaproteobacteria
GTG
His
>WENV170176490
CEOS01083860
339724
Alphaproteobacteria
TTG
Gln
>WENV170176349
CEOS01066841
421153
Alphaproteobacteria
>WENV170176552
CEOS01092037
421153
Alphaproteobacteria
>WENV170176531
CEOS01089466
338286
Alphaproteobacteria
TTG
Gln
>WENV170176195
CEOS01049883
256971
Alphaproteobacteria
TGT
Thr
>WENV170176342
CEOS01065557
147577
Alphaproteobacteria
CCG
Arg
>WENV170176677
CEOS01109941
95928
Alphaproteobacteria
TAG
Leu
>WENV170176348
CEOS01066552
239035
Alphaproteobacteria
CGC
Ala
>WENV170175756
CEOS01004416
236134
Alphaproteobacteria
TAC
Val
>WENV170176345
CEOS01066067
236134
Alphaproteobacteria
TAC
Val
>WENV170176356
CEOS01067308
82652
Alphaproteobacteria
GTA
Tyr
>WENV170176722
CEOS01116844
82652
Alphaproteobacteria
GTA
Tyr
>WENV170176108
CEOS01039631
345376
Alphaproteobacteria
GAC
Val
>WENV170175711
CEOS01000602
357160
Alphaproteobacteria
TTC
Glu
>WENV170175712
CEOS01000602
357160
Alphaproteobacteria
TTC
Glu
>WENV170176655
CEOS01106076
338289
Alphaproteobacteria
GAC
Val
>WENV170175788
CEOS01007949
266911
Alphaproteobacteria
GAA
Phe
>WENV170176150
CEOS01045876
417107
Alphaproteobacteria
GCA
Cys
>WENV170176775
CEOS01121840
151733
Alphaproteobacteria
GGG
Pro
>WENV170176877
CEOS01133766
151733
Alphaproteobacteria
GGG
Pro
>WENV170175917
CEOS01018748
151733
Alphaproteobacteria
GGG
Pro
>WENV170175874
CEOS01015859
339725
Alphaproteobacteria
GAA
Phe
>WENV170176505
CEOS01085363
339725
Alphaproteobacteria
GAA
Phe
>WENV170175725
CEOS01001490
258175
Alphaproteobacteria
CGC
Ala
>WENV170176326
CEOS01063550
258175
Alphaproteobacteria
CGC
Ala
>WENV170176923
CEOS01139314
258175
Alphaproteobacteria
CGC
Ala
>WENV170176708
CEOS01114943
235427
Alphaproteobacteria
CCA
Trp
>WENV170176458
CEOS01079697
167926
Alphaproteobacteria
CAT
Met
>WENV170176669
CEOS01108268
167926
Alphaproteobacteria
CAT
Met
>WENV170176990
CEOS01144812
167926
Alphaproteobacteria
CAT
Met
>WENV170176926
CEOS01139356
364533
Alphaproteobacteria
GCC
Gly
>WENV170176297
CEOS01059093
130084
Alphaproteobacteria
GGG
Pro
>WENV170176063
CEOS01034797
159427
Alphaproteobacteria
GTG
His
>WENV170176786
CEOS01123036
237281
Alphaproteobacteria
CGT
Thr
>WENV170176275
CEOS01056688
243837
Alphaproteobacteria
CGT
Thr
>WENV170176296
CEOS01059035
243837
Alphaproteobacteria
CGT
Thr
>WENV170176343
CEOS01065666
243837
Alphaproteobacteria
CGT
Thr
>WENV170176442
CEOS01077166
243837
Alphaproteobacteria
CGT
Thr
>WENV170176962
CEOS01142492
243837
Alphaproteobacteria
CGT
Thr
>WENV170176017
CEOS01028799
359842
Alphaproteobacteria
GAC
Val
>WENV170176372
CEOS01069884
65244
Alphaproteobacteria
CAG
Leu
>WENV170176868
CEOS01133502
10657
Alphaproteobacteria
GCT
Ser
>WENV170176603
CEOS01098843
237196
Alphaproteobacteria
CGT
Thr
>WENV170176106
CEOS01039383
412281
Alphaproteobacteria
CTG
Gln
>WENV170176196
CEOS01049911
412281
Alphaproteobacteria
CTG
Gln
>WENV170176357
CEOS01067716
412281
Alphaproteobacteria
CTG
Gln
>WENV170176972
CEOS01143178
412281
Alphaproteobacteria
CTG
Gln
>WENV170176105
CEOS01039265
23717
Alphaproteobacteria
TGA
Ser
>WENV170176689
CEOS01112454
266073
Alphaproteobacteria
TTT
Lys
>WENV170177007
CEOS01145488
266073
Alphaproteobacteria
TTT
Lys
>WENV170175915
CEOS01018707
150194
Alphaproteobacteria
TCT
Arg
>WENV170176632
CEOS01102263
339639
Alphaproteobacteria
TTG
Gln
>WENV170176662
CEOS01107413
348246
Alphaproteobacteria
>WENV170176313
CEOS01062254
114040
Alphaproteobacteria
CAA
Leu
>WENV170175752
CEOS01004330
351007
Alphaproteobacteria
TTC
Glu
>WENV170175854
CEOS01014209
23572
Alphaproteobacteria
TGA
Ser
>WENV170176079
CEOS01036333
101826
Alphaproteobacteria
TAG
Leu
>WENV170176173
CEOS01047878
62052
Alphaproteobacteria
GAG
Leu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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