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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180029950
FTJL01031001
339413
Betaproteobacteria
GGT
Thr
>WENV180029691
FTJL01000643
145694
Betaproteobacteria
ACG
Arg
>WENV180029765
FTJL01004185
145694
Betaproteobacteria
ACG
Arg
>WENV180029927
FTJL01022999
145694
Betaproteobacteria
ACG
Arg
>WENV180029675
FTJL01000201
239099
Betaproteobacteria
CTT
Lys
>WENV180030100
FTJL01157499
16378
Betaproteobacteria
GGA
Ser
>WENV180029787
FTJL01005067
147079
Betaproteobacteria
TTG
Gln
>WENV180029998
FTJL01054593
23591
Betaproteobacteria
CGA
Ser
>WENV180030316
FTJL01688462
60320
Betaproteobacteria
TAA
Leu
>WENV180030030
FTJL01075355
59467
Betaproteobacteria
CAA
Leu
>WENV180029871
FTJL01010916
412127
Betaproteobacteria
GCA
Cys
>WENV180029906
FTJL01017636
16499
Betaproteobacteria
GGA
Ser
>WENV180029896
FTJL01015597
16482
Betaproteobacteria
GGA
Ser
>WENV180029922
FTJL01020815
59098
Betaproteobacteria
TAA
Leu
>WENV180030089
FTJL01146785
267868
Betaproteobacteria
GTG
His
>WENV180029704
FTJL01001150
412128
Betaproteobacteria
CCC
Gly
>WENV180030198
FTJL01323409
237352
Betaproteobacteria
CGT
Thr
>WENV180029731
FTJL01002358
146751
Betaproteobacteria
TGG
Pro
>WENV180029666
FTJL01000021
338629
Betaproteobacteria
CAC
Val
>WENV180029942
FTJL01029164
59097
Betaproteobacteria
TAG
Leu
>WENV180030257
FTJL01461858
339485
Betaproteobacteria
CAC
Val
>WENV180029979
FTJL01043555
63422
Betaproteobacteria
CAG
Leu
>WENV180030134
FTJL01204371
255946
Betaproteobacteria
TGT
Thr
>WENV180029703
FTJL01001078
4907
Betaproteobacteria
GCT
Ser
>WENV180029732
FTJL01002358
146760
Betaproteobacteria
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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