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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170734382
LULK01004858
338269
Alphaproteobacteria
GTT
Asn
>WENV170734164
LULK01001890
412259
Alphaproteobacteria
CTG
Gln
>WENV170733716
LULK01000010
237493
Alphaproteobacteria
CCA
Trp
>WENV170733684
LULK01000003
412798
Alphaproteobacteria
CTG
Gln
>WENV170734549
LULK01009505
24760
Alphaproteobacteria
TGA
Ser
>WENV170733669
LULK01000001
254294
Alphaproteobacteria
>WENV170733681
LULK01000002
412917
Alphaproteobacteria
TCC
Gly
>WENV170733664
LULK01000001
237489
Alphaproteobacteria
CAT
Met
>WENV170734493
LULK01007423
147152
Alphaproteobacteria
ACG
Arg
>WENV170733755
LULK01000038
113700
Alphaproteobacteria
>WENV170733662
LULK01000001
159305
Alphaproteobacteria
GTC
Asp
>WENV170733728
LULK01000020
23468
Alphaproteobacteria
GCT
Ser
>WENV170734810
LULK01021523
23468
Alphaproteobacteria
GCT
Ser
>WENV170733674
LULK01000001
339724
Alphaproteobacteria
TTG
Gln
>WENV170734893
LULK01028097
246184
Alphaproteobacteria
GAA
Phe
>WENV170734950
LULK01034350
237197
Alphaproteobacteria
CCA
Trp
>WENV170733947
LULK01000471
338282
Alphaproteobacteria
GTT
Asn
>WENV170734936
LULK01032771
338282
Alphaproteobacteria
GTT
Asn
>WENV170733688
LULK01000003
16408
Alphaproteobacteria
GGA
Ser
>WENV170733685
LULK01000003
95928
Alphaproteobacteria
TAG
Leu
>WENV170734561
LULK01009822
95928
Alphaproteobacteria
TAG
Leu
>WENV170734298
LULK01003425
339454
Alphaproteobacteria
>WENV170733658
LULK01000001
82652
Alphaproteobacteria
GTA
Tyr
>WENV170734329
LULK01003819
237740
Alphaproteobacteria
TTT
Lys
>WENV170734528
LULK01008756
412260
Alphaproteobacteria
TCC
Gly
>WENV170733657
LULK01000001
249907
Alphaproteobacteria
CGC
Ala
>WENV170733715
LULK01000010
236004
Alphaproteobacteria
TTT
Lys
>WENV170734289
LULK01003211
236004
Alphaproteobacteria
TTT
Lys
>WENV170733790
LULK01000104
252148
Alphaproteobacteria
TGT
Thr
>WENV170733756
LULK01000038
161002
Alphaproteobacteria
GTG
His
>WENV170734917
LULK01030509
148083
Alphaproteobacteria
ACG
Arg
>WENV170733730
LULK01000021
243837
Alphaproteobacteria
CGT
Thr
>WENV170734335
LULK01003883
242540
Alphaproteobacteria
TGC
Ala
>WENV170733797
LULK01000115
348781
Alphaproteobacteria
GAA
Phe
>WENV170733675
LULK01000001
152510
Alphaproteobacteria
GGG
Pro
>WENV170734015
LULK01000841
241518
Alphaproteobacteria
CCA
Trp
>WENV170734619
LULK01011757
338760
Alphaproteobacteria
GAA
Phe
>WENV170734538
LULK01009349
342905
Alphaproteobacteria
GGT
Thr
>WENV170734466
LULK01006532
160158
Alphaproteobacteria
GAT
Ile
>WENV170734990
LULK01038711
160158
Alphaproteobacteria
GAT
Ile
>WENV170734686
LULK01014201
95925
Alphaproteobacteria
CAA
Leu
>WENV170734451
LULK01006281
339606
Alphaproteobacteria
>WENV170733757
LULK01000038
412424
Alphaproteobacteria
TCC
Gly
>WENV170735044
LULK01047372
412424
Alphaproteobacteria
TCC
Gly
>WENV170734429
LULK01005802
348246
Alphaproteobacteria
>WENV170733826
LULK01000161
342846
Alphaproteobacteria
GAC
Val
>WENV170734583
LULK01010273
59202
Alphaproteobacteria
TAA
Leu
>WENV170734749
LULK01017790
255832
Alphaproteobacteria
CGC
Ala
>WENV170733970
LULK01000614
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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